KEGG   Phocoena sinus (vaquita): 116760453
Entry
116760453         CDS       T07759                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3B-like isoform X1
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03250  Viral life cycle - HIV-1
psiu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116760453
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    116760453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psiu03019]
    116760453
Messenger RNA biogenesis [BR:psiu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116760453
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N APOBEC3 SNAD4 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-GeneID: 116760453
NCBI-ProteinID: XP_032501201
Ensembl: ENSPSNG00000009704
UniProt: A0A8C9BVS6
LinkDB
Position
10:complement(9487553..9499952)
AA seq 417 aa
MEPQHPRQRAGMGLASKGGCSQRPRIRHPVEWLDRQTFSFHFRNLRFANGRNYTYLCYQV
ERLKHCSPDSSDWGVFQNWVYPCHAELCFLSWFRAKKLSSYEQYHITWFLSWSPCLSCAE
QVAAFLKENRNVRLSIFAARLYYFWKPDYQHGLRLLRHQRAWVRIMSFRDFKYCWENFVY
NQGMPFEPWKKLRKNYQFLVAKLHEILGNTMNLLKTNIFRQQFGNQLRVPQPCYRRKTYL
CYQLKQLDGFTLDKGCFQNKKQRHAEIRFIDKITSLNLDPNQRYKIICYVTWSPCPACAG
ELVDFINGRDNLSLQIFASRLYFHWVKVFQRGLQQLQAAQVSVAVMTRSEFEDCWEEFVD
NQGMPFESWDKLEQYSESISRRLQRILSPSNWNNLEDSFRDLRLGSPSPSSLRSDSR
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggagccccagcacccgagacaaagggcagggatgggactagccagcaaaggaggctgc
agccagaggccccggatcaggcacccagtggagtggttagatcgccaaaccttctccttc
cactttcgcaacctgagatttgccaatgggcggaactacacctacctctgctaccaggtg
gaaagactgaagcactgctctcctgactcctccgactggggggtctttcaaaactgggtc
tatccctgccatgcggaactctgcttcctctcttggtttcgcgctaagaagctgtcctct
tacgagcagtaccacatcacctggttcttatcctggagcccctgcttgtcatgtgcagag
caggtggctgcgttcctgaaggagaacaggaacgtgaggctgagcatcttcgccgcccgc
ctctactacttctggaaaccagattaccagcacgggctgcgcctgctgcgccaccagagg
gcctgggtgcgcatcatgtccttccgagactttaaatactgttgggaaaactttgtgtac
aatcagggaatgcccttcgagccttggaagaaactgcgtaaaaattatcagttcctggtg
gcaaagcttcatgaaattctcggaaacacaatgaatctgctaaaaacaaatatattcaga
caacagtttggcaaccagctccgggtcccacagccctgctaccggaggaagacctatttg
tgctaccagctgaagcagctcgatggcttcacgcttgacaaaggctgcttccaaaacaag
aaacagcgacatgcagaaattcgctttattgacaagatcacctcgctgaatctcgaccca
aaccagcgctacaaaatcatctgctatgtcacgtggagcccctgccctgcctgtgccggg
gaactcgttgatttcatcaatggtcgggacaacctgagcctgcagatctttgcctcccgc
ctgtacttccactgggtcaaggtgtttcagagggggctgcagcagctacaagcagcccag
gtctcagtggctgtcatgacccgctcagagtttgaagactgctgggaagaatttgtggat
aaccaggggatgcccttcgagtcctgggataagctggagcaatacagtgaaagcataagc
cgtcggctccagaggatcctgtcgccctcgaattggaataatttagaggattccttcaga
gacttgagacttggatccccatccccttcatcgttaagaagtgactcaagatga

DBGET integrated database retrieval system