Phocoena sinus (vaquita): 116761070
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Entry
116761070 CDS
T07759
Symbol
RAPGEF3
Name
(RefSeq) rap guanine nucleotide exchange factor 3 isoform X1
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04015
Rap1 signaling pathway
psiu04024
cAMP signaling pathway
psiu04072
Phospholipase D signaling pathway
psiu04081
Hormone signaling
psiu04261
Adrenergic signaling in cardiomyocytes
psiu04670
Leukocyte transendothelial migration
psiu04720
Long-term potentiation
psiu04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
116761070 (RAPGEF3)
04072 Phospholipase D signaling pathway
116761070 (RAPGEF3)
04024 cAMP signaling pathway
116761070 (RAPGEF3)
09133 Signaling molecules and interaction
04081 Hormone signaling
116761070 (RAPGEF3)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
116761070 (RAPGEF3)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
116761070 (RAPGEF3)
09156 Nervous system
04726 Serotonergic synapse
116761070 (RAPGEF3)
04720 Long-term potentiation
116761070 (RAPGEF3)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
116761070
NCBI-ProteinID:
XP_032502678
Ensembl:
ENSPSNG00000016690
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All DBs
Position
10:65541103..65563100
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AA seq
964 aa
AA seq
DB search
MGGGVGQNSPEDREEGPDLRCASWRPLSAPDRQAPVKVSWPGESRWQVGLAVEDSSVLGA
APVGGLPDVVPEGTLLDMVLRRVHRSRSCSYQLLLEHQRPSCIQGLRWTPLANSEESLDF
SVSLEQASTERVLRAGRQLHRHLLATCPNLIRDRKYHLRLYRQCCSGRELVDGILALGLG
VHSRSQAVGICQVLLDEGALCHVKHDWAFQDRDTQFYRFPGPEPEPAGLHELEEEFVEAL
ALLSQRGPDALLTVALRKPPGQRTDEELDLIFEELLHVKAVAHLSNSVKRELAAVLLFEP
HSKAGTVLFSQGDKGTSWYIIWKGSVNVVTHGKGLVTTVHEGDDFGQLALVNDAPRAATI
ILREDNCHFLRVDKQDFNRIIKDVEAKTMRLEEHGKVVLVLERTSQGAGPSRPPTPGRNR
YIVMSGTPEKILELLLEAMRPDSSAHDPTETFLSDFLLTHSVFMPTAQLCAALLHHFHAE
PVGGSEQECSTYVCNKRQQILRLVSQWVALYGPMLHTDPVATSFLQKLSDLVSRDARLSN
LLREQWPERRRHHRLENGCGNTSPQMKVSAPNEARNMPVWLPSQDEPLPSSNCAIRVGDK
VPYDICRPDHSVLTLQLPVTASVREVMAALAQEDGWTKGQVLVKVNSAGDTVGLQPDAHG
VATSLGLNERLFVVNPQEVHKLTPHPEQLGPTVGSAEGLDLVSTKDLAGQLTDHDWSLFN
SIHQVELIHYVLGPQPLRDVTTANLERFMRRFNELQYWVATELCLCPVPGLRAQLLRKFI
KLAAHLKEQKNLNSFFAIMFGLSNSAISRLAQTWERLPHKVRKLYSALERLLDPSWNHRV
YRLALTKLSPPLIPFMPLLLKDMTFIHEGNHTLVENLINFEKMRMMARAARMLHHCRSHS
NVPLSPLRSRVSHLHEDSQAARISTCSEQSLSTRSPASTWAYVQQLKVIDNQRELSRLSR
ELEP
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtggagtggggcagaattccccagaagaccgggaagaaggacctgatctccgg
tgcgccagctggagacccctaagtgcgccagaccggcaggccccagtgaaggtgagctgg
ccaggtgaaagccgctggcaggtgggcctggctgtggaggacagctcagttctgggagca
gcgccggtgggagggctcccggacgtggtgccggaggggacgctgctcgacatggtgctg
aggagggtgcatcggtcccgaagctgctcctaccagctgcttctcgagcaccagcgcccc
agctgcatccaggggcttcgctggacgccactcgccaacagcgaggagtccctggatttc
agcgtgagcctcgagcaggcctccacggagcgggtgctgagggctgggaggcagctgcat
cggcacctcctggccacctgccccaacctcatccgagaccgaaagtaccacctccgactg
taccggcaatgctgctctggccgggaactggtggatgggatcttggccctggggctgggg
gtccattcccggagccaagccgtgggaatctgccaggtgctgctggatgaaggtgccctc
tgtcatgtgaaacacgactgggccttccaggatcgagatacccaattctaccgtttcccc
gggccggagccggagcctgcaggcctccacgagctggaggaggagttcgttgaggctctg
gccctgctctcccagcgggggcctgacgccctgctcacggtggcgctccgaaagcccccc
ggtcagcgcacagacgaggagctggacctcatctttgaggagctgctgcacgtcaaggcc
gtggcccacctctcgaactcggtgaagcgggaattagcggcagttctgctctttgaacca
cacagcaaggcagggaccgtgttgttcagccagggggacaagggcacctcctggtacatc
atctggaagggatctgtcaatgtggtgacccacggcaagggcctggtgaccacagtgcac
gagggagacgacttcggacagctggctctggtgaacgacgcaccccgtgcagccaccatc
atcctgcgagaggacaactgccattttcttcgcgtggacaagcaggacttcaaccgtatc
atcaaggatgtggaagcaaagaccatgaggctggaagaacatggcaaagtggtgttggtg
ctggagagaacctctcagggtgctggcccttctcgtcccccaaccccaggcaggaaccgg
tatatagtgatgtctggcaccccggagaagatcctagaacttctgttggaggccatgcgg
cctgattccagtgctcatgacccaacagagacattcctcagcgacttcctcctgacccac
agtgtcttcatgcccactgcccagctttgcgctgccctcctgcaccatttccatgcggag
cctgtgggaggcagcgagcaggagtgcagcacctacgtctgcaacaagagacagcagatc
ctgcggctggtcagccagtgggtggccctgtacggccccatgctccacaccgaccctgtg
gccaccagcttcctccagaaactgtcagacctggtgagcagggatgcccggcttagcaac
ctgctgcgggagcagtggccagagaggcggcgacaccacaggttggaaaatggctgcggg
aacacatctccacagatgaaggtgtctgccccgaatgaggcccggaacatgcctgtttgg
ctccccagccaggatgaacctctccccagcagcaactgtgccatccgagtcggggacaaa
gtcccctatgacatctgccggccggaccactcggtgctgaccctgcagctgcctgtgacg
gcctcagtgagagaggtgatggcggcgttggcccaggaggacggctggactaaggggcag
gtgctggtgaaggtgaactctgcgggcgacactgttggcctgcagccagatgcccacggt
gtggccacatccctgggactcaacgagcggctctttgttgtcaaccctcaggaagtgcac
aagctgaccccacaccccgagcagctggggcccaccgtgggctctgcagaggggctggac
ctggtgagcaccaaggacctggcgggccagctgacggaccacgactggagcctcttcaac
agcatccaccaggtggagctgatccactacgtgctgggcccccagcccctgcgggacgtc
accaccgccaacctggagcgcttcatgcgccgcttcaatgagctgcagtactgggtggcc
acagagctgtgtctctgccctgtgcccggcctgcgggcccagctgctcaggaagttcatc
aagctggccgcccacctcaaggagcaaaagaatctcaattccttctttgccatcatgttt
ggcctcagcaactcggccatcagccgcctggcccagacctgggagaggctgccccacaaa
gtccggaagctctactcggccctcgagaggctgctggacccctcatggaaccaccgtgtg
taccgtctggccctcaccaagctctcccctcccctcatcccattcatgccccttcttctc
aaagacatgaccttcatccatgagggaaatcacacgctggtagagaatctcatcaacttt
gagaagatgagaatgatggccagagctgcgaggatgctgcaccactgcagaagccacagc
aacgtgcctctgtcaccgcttagaagccgagtctcccacctgcacgaggacagccaggcg
gccaggatttccacgtgctcggagcagtccctgagcacccggagtccagccagcacctgg
gcttacgtccagcagctgaaggtcatcgacaaccagcgggaactgtcccgcctctcccgg
gagctggagccgtga
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