KEGG   Phocoena sinus (vaquita): 116761819
Entry
116761819         CDS       T07759                                 
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:psiu03037]
    116761819 (IFT122)
Cilium and associated proteins [BR:psiu03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   116761819 (IFT122)
SSDB
Motif
Pfam: TPR_IFT122 Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Beta-prop_THOC3 Zn_ribbon_IFT122 Zn_ribbon_IFT122_C WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd EIF3I ANAPC4_WD40 TPR_IF140-IFT172 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 WD40_Gbeta TPR_GEMI5 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_EML Beta-prop_WDR90_POC16_2nd TPR_IFT80_172 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_RSE1_2nd WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin B-prop_COPA_B_2nd eIF2A Beta-prop_HPS5 WD40_MABP1-WDR62_1st TPR_7 Beta-prop_IFT140_2nd TPR_COPA_B Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 116761819
NCBI-ProteinID: XP_032503985
Ensembl: ENSPSNG00000022721
LinkDB
Position
11:complement(4360288..4437963)
AA seq 1182 aa
MRAVLTWRDKAEQCVYDLAFKPDGTQLILAAGNRLLVYDTSDGTLLQPLKGHKDTVYCVA
YAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWS
PEQKSVSKHKSSSKITCCSWTNDGQYLALGMFSGVISIRNRNGEEKVKIERPGGSLSPLW
SICWSPSREEHNDILAVADWGQKLSFYQLSGKQIGKDRSLNFDPCCLSYFTKGEYILLGG
SDKQVSLFTKDGVRLGTVGEQNSWVWTCKVKPDSNYVVVGCQDGTISFYQLIFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIKCKELVKKIAIYKNRLAIQLPEKILVYELYSDDS
LDMRYRVKEKIVRKFECNLLVVCADHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVI
GGPPGREGLLVGLKNGQILKIFVDSLFAIVLLKQATAVRCLDMSASRNKLAVVDENDTCL
VYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASTFPVHQQKLQGFVVGYNG
SRIFCLHAFSMSAVEVPQSAPMYQYLDRKMFREAYQIACLGVTDTDWRELAMEALEGLEF
ETAKKAFTRVQDLRYLELINSIEERKKRGETNNDLFLADVFSYQGKFHEAARLYKRSGHE
NLALDMYTDLRMFEYAKDFLGSGDPKETKMLITKQADWARNINEPKAAVEMYISAGEHGK
AIEISGDHGWVDTLIDIARKLDKAEREPLLMCAHYFKKLDNPGYAAETYLKIGDLKSLVH
LHVDTQRWDEAFALGEKHPEFKDDIYVPYAQWLAENDRFEEAQKAFHKAGRQGEAVRVLE
QLTHNAVVESRFNDAAYYYWMLSMQCLDIAQDPAQKDVMLGKFHHFQHLAELYHGYHAIQ
RYTEEPFSFHLPETLFNISRFLLHSLTKDTPLGISKVNTLFTLAKQSKALGAYKLARHAY
DKLQGLQTPARFQKSIELGSLTIRSKPFQDSEELVPLCYRCSTNNPLLNNLGNVCINCRQ
PFVFSASSYEVLHLVEFYLEEGITDEEAVSLIDLEAPRHKRENKWQEIASNTSQTLRLDE
TLDSMGDDDPFTAKLSFEQGGLEFVPVVVNRSVLRSMSRRDVLIKRWPPPLRWQYFRSLL
PDASITMCPSCFQMFHSEDYELLVLQHTCCPYCRRRIDDPSP
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgagggccgtgttgacgtggagagataaagccgagcagtgtgtatatgaccttgcattt
aagcccgacggaacccaactgattttggctgcaggaaacagattactggtttacgacacg
tctgatggcaccttacttcagcccctaaagggacacaaagatactgtgtactgtgtggca
tatgcgaaggatggcaagcgctttgcttctggatcagctgacaaaagtgttattatctgg
acgtcaaaattggaaggcattctgaagtacacgcacaatgattctatccagtgtgtctcc
tacaaccctgttacccaccagctggcgtcctgttcctccagtgactttggcttatggtct
cctgaacagaagtctgtctctaagcacaaatctagcagcaagatcacctgctgcagctgg
acaaatgacggtcagtacctggctctggggatgttcagcggggtcatcagcatacggaac
agaaacggggaggagaaggtgaagattgagcggccagggggctccctctccccgctgtgg
tccatctgctggagcccttcaagagaggaacataatgacatcctggctgtagctgattgg
ggacagaaactttccttctatcagctgagtggaaaacagattgggaaggatcggtcactg
aactttgacccctgctgcctcagctactttactaaaggggagtacattttgctggggggg
tcagacaagcaagtatcccttttcaccaaggatggagtgcgcctcgggactgttggggag
cagaactcctgggtgtggacgtgtaaagtgaaacccgattccaactatgtggtggtaggc
tgccaggatggcaccatttccttctaccagcttattttcagcacagtccacggactctac
aaggaccgatatgcctacagggatagcatgactgatgtcatcgtgcagcacctgatcacc
gagcagaaagttcggattaaatgcaaagagcttgtcaagaaaattgccatctacaaaaat
cgattagctatccagctgcccgagaaaatcctcgtctacgagttgtattcagatgactcg
ttggacatgcggtaccgggtgaaggagaagattgttaggaaattcgaatgtaacctcctg
gtggtgtgtgccgaccacatcatcctctgccaggagaagcggctgcagtgcctgtccttc
agcggagtgaaggagcgggagtggcagatggagtctctcattcgctacatcaaggtgatc
ggcggccccccaggaagggagggtctgttagtcggcctgaagaacggacagatcctgaag
atctttgtggacagtctctttgccatcgtcctgctaaagcaggccacagccgtgcgctgc
ctggacatgagcgcctcccgcaacaagttggccgtggtggatgaaaacgacacgtgcctg
gtgtatgacatccacaccaaggagttgctatttcaggagccgaacgccaacagtgtggcc
tggaatacccagtgtgaggacatgctctgcttctctggaggcggctacctcaacatcaag
gccagcaccttccccgtgcaccagcagaagctgcagggcttcgtggtcggctacaacggc
tccaggatcttctgcctccacgccttttctatgtcggccgtggaggtgccacagtctgct
ccgatgtaccagtacctggataggaagatgttccgagaagcctaccagattgcttgcttg
ggcgtgacagacactgactggcgcgagctggccatggaagctttagaaggattggagttt
gaaacagcaaagaaggccttcaccagagtacaagacctccggtatttagaactcatcaac
agcattgaggagaggaagaagcggggagagaccaacaatgacctgtttctggcagatgtg
ttttcctaccaggggaagttccacgaggccgccagactgtacaagaggagcgggcacgag
aacctcgcgctcgacatgtacacagacctccgcatgttcgagtacgccaaggatttcctt
ggatctggagaccccaaagaaacaaagatgctaatcaccaaacaggccgactgggctcga
aatatcaacgagcccaaagctgccgtggagatgtacatctcggcaggcgagcacggcaag
gccatagagatcagcggcgaccacggctgggttgacacgctcatcgacattgcccgtaag
ctggacaaggccgagcgggagcccctgctgatgtgcgcccactacttcaagaagctggat
aaccctggctatgctgccgagacctacctgaagattggtgacctgaagtccttggttcac
ctgcatgtggacacccagcgctgggatgaggccttcgccttgggtgagaagcatcccgag
tttaaggatgacatctacgtgccctacgctcagtggctagcagagaacgatcgttttgag
gaagcccagaaagcgttccacaaggccgggcggcagggggaagcagtcagggtgctggag
cagctcacacacaatgccgtggtcgagagcagatttaatgacgctgcctattattactgg
atgctgtccatgcagtgcctcgatatagctcaagaccctgcccagaaggacgtgatgctc
ggcaagttccaccacttccagcacttggctgagctgtaccacggctaccacgccattcag
cggtacacggaggagccgttcagtttccaccttcccgaaacgctcttcaacatctccagg
ttcctgctgcacagcctgaccaaggacactcccctgggcatctctaaagtgaacacgctc
ttcactctagccaaacagagcaaagcactgggtgcctacaagctggcccggcacgcctat
gacaaactgcagggcctgcagacccccgccaggttccagaagtccatcgagctgggcagc
ctgaccatccgctccaagcccttccaggacagcgaggagctggtgcccttgtgctaccgc
tgctccaccaacaacccgctgctaaacaacctgggcaacgtttgcatcaattgccgccag
cccttcgtcttctcagcctcttcttatgaggtgctgcacctggttgaattctacctggag
gaggggattactgatgaagaagccgtctccctaattgacctggaggcgccaagacacaag
cgtgagaataaatggcaagagatcgcaagcaacacttcccagactctgaggctggacgag
accctggactccatgggagacgatgaccccttcacagccaagctgagcttcgagcaaggt
ggcttggagtttgtgcccgtggtggtgaaccgctcggtgctgcgctccatgagccgacgg
gacgtgctcatcaagcgctggcccccgcccctgcggtggcagtacttccgctccctcctg
cccgatgcctccatcaccatgtgcccctcctgcttccagatgttccactcagaggactac
gagctgctggtgcttcagcacacctgctgcccctactgccggaggcgcatcgacgacccc
agcccttga

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