KEGG   Phocoena sinus (vaquita): 116762319
Entry
116762319         CDS       T07759                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DQ alpha 2 chain
  KO
K06752  MHC class II antigen
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04145  Phagosome
psiu04514  Cell adhesion molecules
psiu04612  Antigen processing and presentation
psiu04640  Hematopoietic cell lineage
psiu04658  Th1 and Th2 cell differentiation
psiu04659  Th17 cell differentiation
psiu04672  Intestinal immune network for IgA production
psiu04940  Type I diabetes mellitus
psiu05140  Leishmaniasis
psiu05145  Toxoplasmosis
psiu05150  Staphylococcus aureus infection
psiu05152  Tuberculosis
psiu05164  Influenza A
psiu05166  Human T-cell leukemia virus 1 infection
psiu05168  Herpes simplex virus 1 infection
psiu05169  Epstein-Barr virus infection
psiu05310  Asthma
psiu05320  Autoimmune thyroid disease
psiu05321  Inflammatory bowel disease
psiu05322  Systemic lupus erythematosus
psiu05323  Rheumatoid arthritis
psiu05330  Allograft rejection
psiu05332  Graft-versus-host disease
psiu05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116762319
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116762319
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    116762319
   04612 Antigen processing and presentation
    116762319
   04658 Th1 and Th2 cell differentiation
    116762319
   04659 Th17 cell differentiation
    116762319
   04672 Intestinal immune network for IgA production
    116762319
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    116762319
   05164 Influenza A
    116762319
   05168 Herpes simplex virus 1 infection
    116762319
   05169 Epstein-Barr virus infection
    116762319
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    116762319
   05152 Tuberculosis
    116762319
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    116762319
   05140 Leishmaniasis
    116762319
  09163 Immune disease
   05310 Asthma
    116762319
   05322 Systemic lupus erythematosus
    116762319
   05323 Rheumatoid arthritis
    116762319
   05320 Autoimmune thyroid disease
    116762319
   05321 Inflammatory bowel disease
    116762319
   05330 Allograft rejection
    116762319
   05332 Graft-versus-host disease
    116762319
  09166 Cardiovascular disease
   05416 Viral myocarditis
    116762319
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    116762319
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psiu04147]
    116762319
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116762319
  Exosomal proteins of epithelial cells
   116762319
  Exosomal proteins of breast milk
   116762319
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 Ig_2 C2-set_2 I-set
Other DBs
NCBI-GeneID: 116762319
NCBI-ProteinID: XP_032505057
Ensembl: ENSPSNG00000014515
LinkDB
Position
11:complement(79592885..79600264)
AA seq 256 aa
MMVLNRALILGTLTLTIMMSPCGGEDIVADHFASYGTTIYQSFGPSGQYTQEFDGDEQFY
VDLEKKETVWRLPVFSEFASFDPQGALRNIAVGKHNLDILIKRSNFTPVTNEVPEVTVFS
KFPVLLHQPNTLICLVDNIYPPVINITWLRNGHTVREGVSEISFLTKNDLSFLKISYLTF
LPSDDDVYDCKVEHWGLDEPLLKHWEPEIPKPMSELTETVVCALGLTVGLVGIVVGTVFI
IQGLRSGGPSRHQGPL
NT seq 771 nt   +upstreamnt  +downstreamnt
atgatggtcctgaacagagctctgattctggggaccctcaccctgaccatcatgatgagc
ccctgtggaggtgaagacattgtggctgaccactttgcgtcctatggcacaactatctac
cagtcttttgggccctctggccagtacacccaagaatttgatggagatgagcagttttat
gtggacctggagaagaaggagactgtctggcggctgcctgtgtttagcgaattcgcaagt
tttgacccacagggtgccctgagaaacatagctgtggggaaacataacttggatatcctg
attaaacgctccaactttacccctgttaccaatgaggttcctgaggtgactgtgttttct
aagttccctgtgttgctacatcaacccaacaccctcatctgtcttgtggacaacatctat
cctcctgtgatcaacatcacatggttgagaaacggacacacagtcagagagggtgtctct
gagatcagcttcctcacgaagaatgatctttccttcctcaagatcagttatctcaccttc
ctcccttctgatgatgatgtttatgactgcaaagtggaacactggggcctggatgagcca
ctgctgaaacactgggaacctgagattccaaagcctatgtcagagctgacagagactgtg
gtctgcgccctggggttgactgtgggcctcgtaggcatcgtggtgggcactgtcttcatc
atccaaggcctgcgctcaggtggtccctccagacaccaagggcccttgtga

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