Phocoena sinus (vaquita): 116762322
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Entry
116762322 CDS
T07759
Name
(RefSeq) HLA class II histocompatibility antigen, DR alpha chain
KO
K06752
MHC class II antigen
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04145
Phagosome
psiu04514
Cell adhesion molecules
psiu04612
Antigen processing and presentation
psiu04640
Hematopoietic cell lineage
psiu04658
Th1 and Th2 cell differentiation
psiu04659
Th17 cell differentiation
psiu04672
Intestinal immune network for IgA production
psiu04940
Type I diabetes mellitus
psiu05140
Leishmaniasis
psiu05145
Toxoplasmosis
psiu05150
Staphylococcus aureus infection
psiu05152
Tuberculosis
psiu05164
Influenza A
psiu05166
Human T-cell leukemia virus 1 infection
psiu05168
Herpes simplex virus 1 infection
psiu05169
Epstein-Barr virus infection
psiu05310
Asthma
psiu05320
Autoimmune thyroid disease
psiu05321
Inflammatory bowel disease
psiu05322
Systemic lupus erythematosus
psiu05323
Rheumatoid arthritis
psiu05330
Allograft rejection
psiu05332
Graft-versus-host disease
psiu05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116762322
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116762322
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
116762322
04612 Antigen processing and presentation
116762322
04658 Th1 and Th2 cell differentiation
116762322
04659 Th17 cell differentiation
116762322
04672 Intestinal immune network for IgA production
116762322
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
116762322
05164 Influenza A
116762322
05168 Herpes simplex virus 1 infection
116762322
05169 Epstein-Barr virus infection
116762322
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
116762322
05152 Tuberculosis
116762322
09174 Infectious disease: parasitic
05145 Toxoplasmosis
116762322
05140 Leishmaniasis
116762322
09163 Immune disease
05310 Asthma
116762322
05322 Systemic lupus erythematosus
116762322
05323 Rheumatoid arthritis
116762322
05320 Autoimmune thyroid disease
116762322
05321 Inflammatory bowel disease
116762322
05330 Allograft rejection
116762322
05332 Graft-versus-host disease
116762322
09166 Cardiovascular disease
05416 Viral myocarditis
116762322
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
116762322
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116762322
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116762322
Exosomal proteins of epithelial cells
116762322
Exosomal proteins of breast milk
116762322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_alpha
C1-set
Ig_3
Ig_2
I-set
C2-set_2
ig
Motif
Other DBs
NCBI-GeneID:
116762322
NCBI-ProteinID:
XP_032505061
Ensembl:
ENSPSNG00000014755
LinkDB
All DBs
Position
11:complement(79673226..79677979)
Genome browser
AA seq
253 aa
AA seq
DB search
MAIIGVPIPGFFITVLISLQESWAITEDHVIIQAEFSLSPDQSNEFMFDFDGDEIFHVDM
EKRETVWRLEEFGNFASFQAQGALANMAVGKANLDILIKRSNHTPNTNVPPEVTVLSNTP
VELGEPNILICFINKFSPPVINVTWLQNGKPVTTGVSETVFLPRNDHLFRKFHYLPFVPS
DEDVYDCKVEHWGLEEPLLKHWEYEAPTPLTETTENAVCALGLVVALVGIIVGTIFIIKG
VRKGNTVEHRGPL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggccataattggagtcccaataccaggatttttcatcactgtcctgataagccttcag
gaatcatgggctatcacagaggatcacgtgatcatccaggctgagttctctctgtcccct
gatcaatcaaacgagtttatgtttgactttgatggtgatgagattttccacgtggatatg
gaaaagagggagacagtgtggcggcttgaagaatttggaaattttgccagctttcaggct
cagggtgcattggccaatatggctgtgggaaaagccaacctggacatcttgataaagcgc
tccaaccacaccccaaacaccaatgtacctccagaagtgactgtgctctcaaacacccct
gtggaactgggagagcccaacatcctcatctgtttcatcaacaagttttctccaccagtg
atcaatgtcacatggcttcaaaatggcaaacctgtcaccacaggagtgtcagagacagtc
ttcctgcccaggaatgaccaccttttccgcaagtttcactacctccccttcgtgccctca
gacgaggatgtctacgactgcaaggtggagcactggggtttggaggagcctcttctcaag
cactgggagtatgaagctccaacccccctcacagagaccacagagaacgcagtgtgtgcc
ctgggcctggttgtggctctggtgggcatcattgttgggacgatcttcatcatcaagggt
gtacgcaaaggcaacactgttgaacaccgagggcctctgtga
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integrated database retrieval system