KEGG   Phocoena sinus (vaquita): 116762509
Entry
116762509         CDS       T07759                                 
Name
(RefSeq) NHP2-like protein 1
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03008  Ribosome biogenesis in eukaryotes
psiu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116762509
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    116762509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psiu03041]
    116762509
   03009 Ribosome biogenesis [BR:psiu03009]
    116762509
Spliceosome [BR:psiu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    116762509
Ribosome biogenesis [BR:psiu03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    116762509
SSDB
Motif
Pfam: Ribosomal_L7Ae RNase_P_pop3 UPF0147 DUF2179
Other DBs
NCBI-GeneID: 116762509
NCBI-ProteinID: XP_032505420
Ensembl: ENSPSNG00000016417
UniProt: A0A8C9CHP4
LinkDB
Position
11:complement(26605626..26606486)
AA seq 128 aa
MTEADVNLKAYPPADAHLTKKLLDLVQQSCNYKQLRKGANEATETLNRGISEFTVMAADA
EPLEIILYLPLLCEDKNVPYVFVRSKQALGRACGASRPVIACSVTIKEGSQLKQQIQSIQ
QSIERLLV
NT seq 387 nt   +upstreamnt  +downstreamnt
atgactgaggctgatgtaaatctgaaggcctaccctcccgcagatgcccacctcaccaag
aaactattggacctcgttcagcagtcatgtaactacaagcagcttcgaaaaggagccaat
gaggccacagaaaccctcaacagaggcatctctgagttcactgtgatggctgcagacgcc
gagcccctggagatcattctgtacctcccactgctgtgtgaggacaagaatgtgccctac
gtgtttgtgcgctccaagcaggccctgggacgagcctgtggggcctccaggcctgtcatc
gcctgttctgtcaccatcaaagaaggctcacaactgaagcagcagatccaatccatccaa
cagtccattgaaaggctcttagtctaa

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