Phocoena sinus (vaquita): 116763180
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Entry
116763180 CDS
T07759
Symbol
SLC22A2
Name
(RefSeq) solute carrier family 22 member 2 isoform X1
KO
K08199
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
116763180 (SLC22A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116763180 (SLC22A2)
Transporters [BR:
psiu02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
116763180 (SLC22A2)
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
116763180 (SLC22A2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
116763180
NCBI-ProteinID:
XP_032506481
Ensembl:
ENSPSNG00000017306
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All DBs
Position
12:7559921..7594436
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AA seq
625 aa
AA seq
DB search
MPTMDDILEHIGEFNFFQKQTFLFLALLSAAFTPIYVGIVFLAFTPDHRCRSPGVPELSR
RCGWSLVEELNYTVPGPGPEGQAFPRQCRRYEVDWNQSALGCVDPLAGLAANSSLLPLGP
CRYGWVYDTPGSSIVTEFNLVCTNSWMLDLFQSAVNVGFFIGSVGIGYIADRFGRKLCLL
ITILINASSGVLMAISPNYTWMLIFRLIQGLVSKAGWLIGYILITEFVGLSYRRTVGILY
QVAFTVGLLVLAGVAYVLPHWRWLQFTVTLPNFCFLLYYWCVPESPRWLISQNKDAKAMK
IIKHIAKKNGKSLPTSLQSLGSDEEVGEKLNPSFLDLVRTPQIRKHTLILMYNWFTSSVL
YQGLIMYMGLAGSNIYLDFLYSALVEFPAAFIILVTIDRVGRRHPWAASNMVAGAACLAS
VFIPEDLRWLRVTVVCLGRMGITMAYEMVCLVNAELYPTCIRNLGVLVCSSMCDIGGIIT
PFLVYRLTSIWHELPLVVFAVVGLVAGGLVLLLPETKGKTLPETIEEAENMQRLRGSSES
FFKSSQNAKKFSNIFIESGPHKRTRAVQTRAVQGSAVRCWERMWGNRLYPTSRVGVRFKT
SMMGNITIVSKLQMCLSFYLAIPRF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaatggacgacatcctagaacacataggggaattcaactttttccagaaacaa
acatttctcttcctcgctctgctctctgccgccttcacccccatctacgtgggcattgtc
ttcctggccttcaccccggaccaccgctgccggagccccggggtgcccgagctgagccgt
cgatgcggctggagcctggtcgaggagctcaactacacggtgccgggccccgggcccgag
ggccaggcattcccccgccagtgccgccgctatgaagtggactggaaccagagcgccctc
ggctgcgtggacccgctggccggcctggccgccaacagcagcctcctgcctctgggcccc
tgtcggtacggctgggtgtacgacacgcccggctcctccatcgtgaccgagtttaaccta
gtgtgtaccaactcctggatgctggacctgtttcagtcggctgtgaatgtaggatttttt
atcggttctgtgggtatcggctacatagcagacaggtttggccgtaagctctgcctcttg
attacaatcctcataaatgcttcatctggagttctcatggctatttccccaaactataca
tggatgctaatttttcgcttgatccaaggactggtcagcaaggcaggctggttaataggc
tacatcctgattacagaatttgttgggctgagctaccggagaacagtggggattctttac
caagtggcctttacggttgggctcctggtgcttgctggggtggcatacgtacttccacac
tggaggtggctgcagttcacagtgactctgcccaacttctgcttcttgctctattactgg
tgtgtacctgagtctcctaggtggctgatctcccagaacaaagacgccaaagccatgaaa
atcattaaacacatagcaaagaaaaatggaaaatctctgcctacctctcttcagagcctc
ggatctgatgaggaagttggcgagaagttgaatccttcatttcttgacttggtcagaacc
cctcagataaggaaacacactttgatcttgatgtacaactggttcacgagctctgtcctc
taccagggcctcatcatgtacatgggcctcgccgggagcaacatctacctggacttcctc
tactctgccctggtcgaattcccggccgcctttatcatcctcgtcacaattgaccgcgtg
ggtcgccgtcatccatgggctgcgtcaaatatggtggcaggggcagcctgtttagcctcg
gtttttatccctgaggatctacgctggctaagagttaccgtcgtatgcttgggtagaatg
gggattacaatggcctatgaaatggtctgcctggtcaatgcggaactgtaccccacatgc
atcaggaaccttggggtcctcgtctgctcttccatgtgtgacatcgggggcatcatcacg
ccgttcctggtctaccggctcaccagcatctggcatgagcttccactggtggttttcgct
gtagttggcctggttgctggaggactggtgttattgctcccagagaccaaagggaagact
ttgcctgagaccattgaggaagctgaaaacatgcagaggctacgtggttcatctgagagc
tttttcaaatcatcacaaaatgccaaaaaattttccaatatatttattgaaagtggacca
cataagcggacccgtgcagttcaaacgcgtgctgttcaagggtccgctgtacgatgttgg
gaaaggatgtggggaaataggctgtatcctacatcgcgagtaggagtcagatttaaaacc
tctatgatgggcaatataacaatagtatcaaaattacaaatgtgcttatctttttaccta
gcaattccacgcttctag
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