Phocoena sinus (vaquita): 116763186
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Entry
116763186 CDS
T07759
Symbol
DSE
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
psiu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
116763186 (DSE)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
116763186 (DSE)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
SYF2
Motif
Other DBs
NCBI-GeneID:
116763186
NCBI-ProteinID:
XP_032506488
Ensembl:
ENSPSNG00000015522
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Position
12:complement(43950345..44021236)
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AA seq
993 aa
AA seq
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MRTHTRGAPSVFFIYLFCFVSAYVTDENPEVMIPFTNANYDSHPMLYFSRAEVAKLQLRA
ASSHEHIAARLTEAVHIMLSSPLEYLPPWDPKEYSARWNEIYGNNLGALAMFCVLYPENI
EARDMAKDYMERMAAQPSCIFAYLSSENKSQRKEITSLLRWCQSATGIQNWLVKDAPWDE
VPLAHSLVGFATAYDFLYNYLSKTQQERFLEVIANASGYMYETSYRRGWGFQYLHNHQPT
NCMALLTGSLVLMNQGYLQEAYLWTKQVLTIMEKSLVLLREVTDGSLYEGVAYGSYTTRS
LFQYMFLVQRHFDINHFGHPWLKQHFAFMYRTILPGFQRTVAIADSNYNWFYGPESQLVF
LDTFVMRNGSGNWLADQIRRNRVMEGPGTPSKGQRWCTLHTEFLWYDASLKSVPPPDFGT
PALHYFEDWGVVTYGSALPAEINRSFLSFKSGKLGGRAIYDIVHRNKYRDWIKGWRNFNA
GHEHPDQNSFTFAPNGVPFITEALYGPKYTFFNNVLMFSPAVSKSCFSPWEGQVTEDCSS
KWSKYKHDLAASCQGRVVAAMEKNGVVFIRGEGVGAYNPQLHLKNVQRNLILLHPQLLLL
VDQIHLGEDSPLETAASFFHNVDFSFEETVVDGVHGAFIRQRDGLYKMYWMDDTGYSEKG
TFASVTYPRGYPYNGTNYVNVTTHLRSPITRAAYLFIGPSIDVQSFSIHGDSQQLDVFIA
TSEHAYATYLWTGETTEQLALAQVIADRQKILFDWSSAIKSTVVPEVKDYTAIVEQNLQH
FKPVFQLLEKQILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQQQQQQSKS
KKNRRRGGKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMKDLLDFADV
TYEKHKNGDLMKGRFGQARMVTTTRSRAPALSASYTRLFLILNIAIFFVMLAMQLTYFQR
AQSLHGQRCLYAVLLVDSCILLWLYSSCSQSQC
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcacacacggggggctcccagtgtgtttttcatatatttgttttgctttgtg
tcagcctatgtcaccgacgagaacccagaagtcatgattccctttacaaatgccaactac
gacagccatccaatgctgtacttctccagggcggaggtggccaagctccagctcagagct
gccagctcccacgagcacattgccgcccggctcaccgaggccgtgcacatcatgctgtcc
agccccttggagtacctccctccctgggatcccaaggagtacagcgcccgctggaatgaa
atttacggcaacaacttgggagccttggccatgttctgcgtgctgtatcctgagaacatt
gaagcccgagatatggccaaagactacatggagaggatggcagctcagcctagttgtatt
tttgcttacttatcatcagaaaataaatcacagaggaaagaaattacttcactcttgcgt
tggtgccagtcagcgacaggaattcagaactggttggtgaaagatgctccttgggatgaa
gttccacttgctcactccctggttggttttgccactgcctatgacttcttgtacaactac
ctgagcaagacacaacaggagaggtttcttgaggtgattgccaatgcctcgggatatatg
tatgaaacttcatacaggagaggatggggatttcaatacctgcataaccatcagcccacc
aactgcatggccttgctcacaggaagcctggtcctgatgaatcaagggtatcttcaggaa
gcttacttatggaccaaacaagttctgaccatcatggagaagtctcttgtcttgctccga
gaggtgacagatggctccctctacgaaggagttgcatatggcagctacaccactagatca
ctcttccagtatatgtttcttgttcagaggcactttgacatcaaccactttggccaccca
tggcttaaacaacactttgcatttatgtatagaaccatcctgccagggtttcaaagaact
gtggctattgcagactcaaattacaactggttctatggtccagaaagccaattagtgttc
ctggacacatttgtcatgcgtaacggcagtggcaactggttggctgaccagatcagaagg
aaccgtgtgatggaaggtccagggacgccttccaaagggcagcgctggtgtacgcttcac
acagaatttctctggtatgatgccagcttgaaatctgtcccccctccagattttggcacc
ccagcattgcattattttgaagactggggtgttgtgacttatggaagtgcgctgcctgca
gaaatcaatagatctttcctttccttcaagtcaggaaaacttgggggacgtgcaatatat
gacattgtccacagaaacaaatacagagactggatcaaaggctggagaaattttaatgca
gggcatgaacatcctgatcaaaactcctttacttttgctcccaacggtgtgcctttcatt
actgaggctctctatgggccaaagtataccttcttcaacaatgttttgatgttttcccca
gctgtgtccaagagctgcttttctccctgggaaggtcaggtcacagaagactgttcatca
aaatggtctaaatacaagcatgacctggcagctagctgtcaggggagagttgttgctgca
atggagaaaaatggtgtggttttcatccgaggagagggtgtgggcgcttataacccccag
ctccatctgaagaacgttcagaggaatctgatcctcctgcatccacagcttcttctcctc
gtggatcagatacacctgggagaggacagccccttggagacagcagcaagcttcttccac
aatgtggatttttcttttgaggagacagtggtagatggggtccatggggctttcatcagg
cagcgagatgggctctataaaatgtactggatggatgatactggctacagtgagaaagga
acctttgcttcagtgacataccctcggggctatccctacaacgggaccaactatgtgaat
gtcaccacacacctccgaagtcccatcaccagggcagcttacctcttcatagggccctcc
atagatgttcagagcttcagcatccacggagactctcagcagctggatgtgttcatagcc
accagtgagcatgcctacgccacttacctgtggacaggtgagactacagaacagttggcc
ttggcacaggtcattgccgaccgtcagaaaattctgtttgactggagttcagccatcaag
agcaccgttgtccctgaggtgaaggactacaccgctattgtggaacagaacctgcagcat
tttaagccagtgttccagctgctggagaagcagatcctgtcccgagtccggaacacagcc
agctttaggaagactgctgagcgcctgctgaggttttcagataagagacagactgaggag
gccatcgacaggatttttgccatatcacagcaacagcagcagcagcagcaaagcaagtcc
aagaaaaaccgaaggaggggaggcaagcgctataaatttgtggatgccgtccctgatatt
tttgcacagattgaagtcaatgaaaaaaagattcgacagaaagctcagattttggcacag
aaagaactgcccatagatgaagatgaagaaatgaaagaccttttagattttgcagatgta
acatatgagaaacacaaaaatggtgatttgatgaaaggccggtttggacaggctcggatg
gtgacgacgactcgcagccgagccccagcactgtctgcttcgtataccaggctgttcctg
attctgaacatcgcgattttctttgtcatgttggcaatgcaactgacttatttccagagg
gcccagagcctacatggtcaaagatgtctttatgcagtccttctagtagatagctgtatt
ttattatggttgtactcttcttgttcccaatcacagtgttag
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