Phocoena sinus (vaquita): 116763624
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Entry
116763624 CDS
T07759
Symbol
TNFAIP3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04064
NF-kappa B signaling pathway
psiu04217
Necroptosis
psiu04621
NOD-like receptor signaling pathway
psiu04657
IL-17 signaling pathway
psiu04668
TNF signaling pathway
psiu05162
Measles
psiu05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
116763624 (TNFAIP3)
04668 TNF signaling pathway
116763624 (TNFAIP3)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
116763624 (TNFAIP3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116763624 (TNFAIP3)
04657 IL-17 signaling pathway
116763624 (TNFAIP3)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
116763624 (TNFAIP3)
05169 Epstein-Barr virus infection
116763624 (TNFAIP3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116763624 (TNFAIP3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116763624 (TNFAIP3)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116763624 (TNFAIP3)
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C64
116763624 (TNFAIP3)
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
116763624 (TNFAIP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
116763624
NCBI-ProteinID:
XP_032507502
Ensembl:
ENSPSNG00000017627
LinkDB
All DBs
Position
12:complement(25924366..25940255)
Genome browser
AA seq
828 aa
AA seq
DB search
MAEQLLPLALYLSNMRKAVKIRERTPEDIFKPTNGIIHHFKSMHRYTLEMFRTCQFCPQF
REIIHNALIDRNIQASLESQKKLNWCREVRKLVALKTNGDGNCLMHAASQYMWGVQDTDL
VLRKALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCYDTRNWTDEWDSLVKMASTDIP
VARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPA
QECYRYPIILGYDSQHFVPLVTMKDSGPEIRAVPLVNRERGRFEDLKVHFLTDPENEMKE
KLLKEYLMVIEIPVQGWDHGTTHLINAAKLDEANLPKEINLVDDYFELVQHEYKKWQENN
EQGRRDTHPQNPLEPSVPQLSLMDIKCETPNCPFFMSVNTQPLCHECSERRQKKQTKAPK
PNSKPGPEALPRLVLGASRGEAWSPEEPTGGPHSAPPTAPSLFLFSETTAMKCRSPGCPF
TLNVQHNGFCERCHNARQLLAGHPSDPAQHLDPGKCRACLQDVTRTFNGICSACFKRTTA
EPAPNLSSSSPLSCHQRSKSDPSQLAQSLSPHACRRAGPEAPSGHRSSAARTPGDRKGTS
KCRKAGCMYFGTPENKGFCTLCFIEYRENKHFVPASGKASPTASRFQNTVPCLGRECGAL
GSSVFEGYCQKCFIEAQNQRFHEAKRTEEQLRTSQHRDLPRATQSTSCPSARGPPARNML
ACCKPGAVHWSASTSASAWPPAPGGPSPSLRSPPRSAAGRPPVSTSATPSETATAYECFQ
FKQMYGYLTQGASPGPEGPGALAPRGAVLPSAPVPPEGPALHGGPGCL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcaactccttcctctggctttgtatttgagcaatatgcggaaagctgtgaag
ataagagagagaactccagaagatatttttaaacctaccaatggaatcattcaccatttt
aaatccatgcaccggtacacgctggaaatgttcagaacttgccagttttgtccacagttt
cgggagatcatccacaatgctctcatcgacagaaacatccaggcctccctggaaagccag
aagaagctcaactggtgccgagaagtcaggaagcttgtggcgctgaaaacaaatggtgac
ggaaactgcctcatgcacgctgcttcccagtacatgtggggtgttcaggacacagacttg
gtcctgaggaaggcgctcttcagcaccctcaaggagacggacacccgcaactttaaattc
cgctggcagctggagtctcttaagtctcaggaattcgtggaaacggggctttgctacgat
acccggaattggactgatgaatgggacagccttgtcaaaatggcatccacggacatacca
gtggcccgcagtggactgcagtataattcactggaagaaatacacatatttgtcctttgc
aacatcctcagaaggccgatcattgtcatttcagacaaaatgctgagaagtttggaatcg
ggttccaattttgctcctttgaaggtgggcggaatttacttgcctctccattggcctgcc
caggaatgctacagataccccatcattctcggctacgacagccaacactttgtacccctg
gtgaccatgaaggacagtggacctgaaatccgagctgttccacttgttaacagagagaga
ggaagattcgaagacttaaaagttcactttttgacagatcctgaaaatgagatgaaggaa
aagctcctgaaagagtacttgatggtgatagaaatccctgttcaaggctgggaccatggc
accacccatttaattaacgctgcaaagttggatgaagctaacttacccaaagaaataaac
ctggtagatgattactttgaacttgtccagcacgagtacaagaagtggcaggaaaacaat
gagcaggggcggagagacacgcacccccagaatcctttggaaccttccgtcccccagctt
tctctcatggacatcaaatgcgaaacgcccaactgccctttcttcatgtccgtgaacacc
caacctttgtgccacgagtgctcggagaggcggcaaaagaaacaaaccaaagccccaaag
cccaactccaagccgggccctgaagcgctgccccgcctggtgctcggggcctcccggggg
gaggcctggagccccgaggagcccaccgggggtccccactcagcccctccgacagcaccc
agcctcttcctgttcagcgagaccacggccatgaagtgtaggagccccggctgccctttc
accctcaacgtgcagcacaatggcttctgcgagcgatgccacaacgcccggcagcttctc
gcgggccacccctcggaccctgcgcagcatctcgaccctggcaagtgccgagcctgcctc
caggacgtcaccaggacgtttaatgggatctgcagtgcttgctttaaaaggactacagcc
gagcccgccccgaacctcagctcgagcagccccctctcctgccaccagcgctccaagtct
gacccctcacagctcgcacagagcctctccccgcacgcctgccgcagagccgggcccgag
gctccctctggccaccgctcctcggccgcacggactccaggggacaggaaagggacaagc
aagtgcaggaaagcgggctgcatgtactttgggactccagagaacaaaggcttctgcacg
ctgtgtttcatcgagtacagagaaaataaacattttgtccctgcctcagggaaagccagc
cccacggcctccaggttccagaacactgtcccctgcctgggcagggaatgcggcgccctc
ggaagcagtgtgttcgaaggatactgtcagaagtgtttcatcgaagctcagaaccagaga
tttcatgaagcgaaaaggactgaagagcagctgaggacgagccagcacagagacttgccc
cgagccacccagagcacctcctgtccaagtgcacgcgggccacctgccaggaacatgctg
gcctgctgcaaaccaggagctgtgcattggagtgccagcacctcggccagcgcatggccg
ccagcgcccggcggcccgagcccgtccctgaggagccccccacgcagcgctgccgggcga
ccgcctgtgagcacttcggcaacgccaagtgaaacggctactgcatacgagtgctttcag
ttcaagcagatgtacggctacctgacccagggggccagccccggcccggaggggcctgga
gccttagccccgcgtggcgctgtgctcccaagcgccccggtgccacccgagggtccggcc
ctgcacggtgggccagggtgtctctga
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