Phocoena sinus (vaquita): 116763724
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Entry
116763724 CDS
T07759
Symbol
RSPH3
Name
(RefSeq) LOW QUALITY PROTEIN: radial spoke head protein 3 homolog
KO
K23965
radial spoke head protein 3
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116763724 (RSPH3)
Cilium and associated proteins [BR:
psiu03037
]
Motile cilia and associated proteins
Radial spoke
116763724 (RSPH3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radial_spoke_3
DUF4034
PMI1_PMIR1-2_C
Motif
Other DBs
NCBI-GeneID:
116763724
NCBI-ProteinID:
XP_032507688
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Position
12:8476668..8509699
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AA seq
753 aa
AA seq
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MKMINKLHDSVLRKGECLVLLDIVSQPEKPKVSAIFILARWRKQAGTKAIKTSYRRKEES
RGAHVAVIQIPDSSDARSRPIPAALPFRKSRELPLETSKHTLLAKTGPCTSSSPLPVLLS
PKLHVVASFLCHTGLKEPGCHACATVGGQPEVEARRQCREKQPRAAPEERGLGERRQHRP
RKATLKSGAGDRRRPPQSSARSAMPGSFTRRCIYLVDLGGRSQKPEVPWRTGLPPKPASR
NFPEVPLPAGTPGCWATGAGGAGGLSAAPSKPSVAPTSCPGDFPSRPLPFLPPLLASRNP
CPWHYVHLFGSHDTFVATCFEAKLHRKRSGLTLGVACTLTDRASPAMDTYTYTSRPRALP
CRRRRYRDDQMQRAEEPMCYGNIMYDRRVIRGNTYALQTVPLPGQPDPAEIQRQQEAKRR
ALAKKRAQEQLRPRTPEPVEGRKHVDVQTELYLEEIADRIIEVDMECQTDAFLDKPPTPL
FIPAKTGKDVATQILEGELFDFDLEVKPMLEVLVGKTIEQSLLEVMEEEELANLRAHQRA
REELRHVELAEVQRLEERERRHREEKERRKQQQWQVVHKHNETAQKIAAQAFAQRYLADL
LPSVFSSLRDGGYFYDPVERDIEVGFLPWLMNEVDKTMECSMVGRTVVDMLIREVVGKRL
SLYERKEDRHSSLKPEDGLSGPGGMRDPPVGYEFQDHGASQAQRPLPDTDSLQRTPYDAR
YMERVSSQDRKLMEEEDEQTXMRKSFRSEELLQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatcaataagctacacgactctgttctgagaaaaggggagtgtttagttctt
ctcgacattgtatctcaaccagaaaagcctaaggtcagtgcgattttcattcttgcaagg
tggaggaagcaagctggaaccaaagcgataaagacatcatacagaaggaaagaggaaagt
aggggtgcccacgttgctgtcattcaaatccctgattccagcgacgcccgaagccgtccc
atccccgcagcgctgccattccggaagtcacgtgaactgcccttagaaacatcaaagcat
accctgcttgccaagacgggaccgtgcaccagctcctcccctctgcctgtgctgctgtcc
cccaaactccatgtggttgcttccttcttatgtcatacgggtctcaaggagcctgggtgc
cacgcgtgtgcgaccgtaggtggacagcccgaagtagaggcgcggcgtcagtgccgggag
aagcagccgagggcggcccccgaggaacgaggcctgggagaacggcgccaacacaggccc
cgcaaagccacactcaaaagtggggccggggaccgccgccgtcctcctcaatcctccgcg
aggtccgccatgcccgggtccttcacgcgcaggtgcatctacctggtagacttgggtggg
cggagtcaaaagccggaagtgccctggcgcactggtcttcccccgaaacccgccagccgg
aacttccctgaggtcccgcttccagccggaacgccgggttgctgggcaaccggtgcgggt
ggcgccggcgggctcagtgctgcaccgagtaagccgagtgtagctcccacctcctgccct
ggcgacttcccgtcccgcccgcttccgttcttgcctcctctccttgcgtcgcggaatccc
tgtccttggcactacgtgcacctcttcggctcccacgacactttcgtggccacctgcttc
gaagccaagcttcaccgaaagcgaagcggtctgaccctgggcgtggcctgcacgttgacg
gaccgcgcctctccggccatggacacctacacctacaccagccggccccgggccctgcct
tgccggcgccgccgttaccgggacgaccagatgcagcgagctgaagaacctatgtgttac
ggaaacataatgtatgacagaagggtgatccgaggcaacacttatgctctgcagacagta
ccactgcctgggcagcccgatcctgcagagattcagagacagcaggaggctaagaggagg
gctcttgccaaaaaacgagcccaagaacagctcagaccacgaacgcccgaacccgtggaa
ggcagaaagcatgtagatgtacagacagaattataccttgaagaaattgctgaccgcata
atagaagttgatatggaatgccaaacagatgcatttttggacaaaccaccaacaccgctc
tttattcctgccaaaactggcaaagatgtggccacccaaattctagaaggagagctcttt
gactttgatcttgaagttaaaccaatgttagaagttttggtgggaaagaccatcgagcag
tctcttctggaagtaatggaagaagaagagttggcgaacctgcgggcccatcagcgcgca
cgtgaggagttacgccacgtcgagcttgcggaagttcagcgacttgaagagcgggagagg
cgacaccgagaggaaaaggaacgtcgtaagcagcagcagtggcaggtggttcacaagcac
aatgagactgcacagaaaatcgccgcccaagcgtttgcacagcgttacctggccgacctt
ctcccttctgttttcagcagcctcagggatggaggctacttttatgatcctgttgaaaga
gatattgaggtaggattccttccatggctaatgaatgaagttgacaaaaccatggagtgc
agcatggttggaagaacagtggttgacatgttgattcgtgaggtggttggaaaacgactg
agtctgtatgagcgtaaggaggacaggcactcttctctgaaacctgaggatgggctcagt
ggtcctggaggaatgagagacccaccggtgggctacgagttccaggatcacggtgcatca
caggcacagaggccacttccagacacagactccctgcaaagaacaccgtatgatgcaagg
tatatggagagagtgtcatcccaagacaggaagcttatggaagaagaggatgagcaaaca
nnaatgaggaagtccttcaggagtgaagaactgttgcaatag
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