Pseudomonas silvicola: LZ023_09830
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Entry
LZ023_09830 CDS
T10729
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
psiv Pseudomonas silvicola
Pathway
psiv01501
beta-Lactam resistance
psiv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LZ023_09830
01503 Cationic antimicrobial peptide (CAMP) resistance
LZ023_09830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiv03036
]
LZ023_09830
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiv02000
]
LZ023_09830
01504 Antimicrobial resistance genes [BR:
psiv01504
]
LZ023_09830
Chromosome and associated proteins [BR:
psiv03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LZ023_09830
Transporters [BR:
psiv02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LZ023_09830
Antimicrobial resistance genes [BR:
psiv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LZ023_09830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
Beta-barrel_RND
BSH_RND
BSH_CzcB
HH_MFP_RND
RND-MFP_C
YknX_C
Biotin_lipoyl
BSH_YknX
BSH_LcnD
CzcB_C
BSH_CusB
BMFP
HH_EMRA
Beta-barrel_YknX
Motif
Other DBs
NCBI-ProteinID:
WAH59809
LinkDB
All DBs
Position
complement(2106966..2108063)
Genome browser
AA seq
365 aa
AA seq
DB search
MQRVAQQVAHHGQQEGRVVAGSGQFTAPKPPVAVAVATASQRAWQSRLPAVGSLKALQGV
NLSLEVAGTVRSIQFDSGQQVKAGQPLLQLDSDVETALLGTAQADLGLAQVDYGRGAQLV
DSHAISRGEFDRLNAVLLKNKATVAQLKASLAKKNIVAPFTGTIGIRRVDVGDYLASGTV
IATLQDLSSLYVDFYVAEQVIPQVHLDQTVLVTVAAWPGQTFEGRISALNPKVEDSTRNI
LIRATLANPQGKLLPGMFANLQIVLPQPRNEVVVPESAVAYTLYGNSLYVIAEKHEADGK
PSTDAQGRPVLIAERRFVDTGERRDGVVIISKGLKAGEQVVTGGQLKLTSGAAVSISPDQ
TQPNH
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgttgcgcagcaagttgcccatcacggccaacaggaaggtcgcgttgtagcg
ggtagcgggcagttcaccgcgcccaaaccaccggtggccgttgccgtggccaccgccagc
cagcgcgcctggcagtcgcggttgccggccgtgggcagccttaaggcgctgcagggcgtc
aacctcagcctggaagtggctggcacggtgcgcagcatccagttcgattccggccagcag
gtgaaggccggccaaccattgctgcaattggacagcgacgtggagacagccctgctgggc
accgcccaggcagaccttggcctggcccaggtggactacggccgcggggcgcaactggtg
gacagccacgctatctcccgaggcgagttcgaccgcctcaacgccgtgctgctcaagaac
aaggccaccgtggcgcagctcaaggccagcctggcgaagaagaacatcgtcgcgcccttc
acggggaccatcggcattcgccgggtcgacgtgggggactacctggccagcggtacggtg
atcgcgaccctgcaggacctgagcagtttgtacgtggacttctacgtggccgagcaggtc
attccccaggtgcatctggaccagacggttctggtaacggtcgccgcctggcccgggcaa
acgttcgagggccggatcagcgccttgaaccccaaggtcgaggacagcacgcgcaacatt
ctcatccgcgccaccctggccaacccccagggcaaactgttgccaggcatgttcgccaac
ctgcagatcgtgctgccacaacccagaaacgaggtcgtggtgcccgaaagcgcagtggcc
tacaccctgtacggcaactcgttgtatgtgatcgcagagaaacatgaagccgatggcaag
ccgagcacggatgcccagggcagaccggtgctgatcgccgaacgccgtttcgtcgatacc
ggcgaacgtcgcgatggggtggtcatcatcagcaaggggctcaaggccggcgagcaagtg
gtcaccgggggccaactgaaactcaccagcggcgcggccgtcagcatcagccccgaccag
acccagcccaaccactga
DBGET
integrated database retrieval system
