Pseudomonas silvicola: LZ023_17730
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Entry
LZ023_17730 CDS
T10729
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
psiv Pseudomonas silvicola
Pathway
psiv01501
beta-Lactam resistance
psiv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LZ023_17730
01503 Cationic antimicrobial peptide (CAMP) resistance
LZ023_17730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiv03036
]
LZ023_17730
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiv02000
]
LZ023_17730
01504 Antimicrobial resistance genes [BR:
psiv01504
]
LZ023_17730
Chromosome and associated proteins [BR:
psiv03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LZ023_17730
Transporters [BR:
psiv02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LZ023_17730
Antimicrobial resistance genes [BR:
psiv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LZ023_17730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
HH_YBHG
HH_EMRA
BSH_CzcB
BSH_CusB
HH_CzcB
YknX_C
DUF5048
Motif
Other DBs
NCBI-ProteinID:
WAH61241
LinkDB
All DBs
Position
3798405..3799547
Genome browser
AA seq
380 aa
AA seq
DB search
MKLKPCVTTVVAAAALACLLSGCNKEAAAPAQQTPEVGVVTLHPQPYALTREVPGRVTAF
RVAEVRPQVDGVILKRLFKEGTDVKAGEQLYQIDPSVYEATLASAKASLASAKSLADRYK
QLIDEQAVSRQEYDNARSTELQDQAALMTAQINMRYTKVLAPIDGRIGRSSVTEGALVTS
AQTTAMATIQQLDPIYVDVTESSANLLKLRKALASGQLQKAGDNGAKVKLTLEDGSAFNQ
DGTLEFSEVSVDESTGSVTLRAKFPNPDHTLLPGMFVHAQLQAGIASTAILAPQQGVTHD
LKGTPTALVVNADNKVELRELKASRTVGTDWLIEDGLHDGDRVITEGLQYVKPGETVKVS
AASNVEPAANAQASVAAKGE
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaagccttgcgtgaccaccgtggtcgccgcagcggccctggcctgcctgctc
agcggctgcaataaagaggcggccgcccccgcccagcagacgcccgaggtcggcgtggta
accctgcacccacaaccctacgccctgacccgtgaagtccccggccgtgtcaccgccttc
cgggtcgccgaagtgcgcccccaggtagatggcgtcattctcaaacgcctgttcaaggaa
ggtacagacgtcaaggctggcgagcagctgtaccagatcgacccctcggtgtacgaagcc
accctggccagcgccaaggccagcctggcctccgccaagtccctggccgaccgttacaag
cagttgatcgatgaacaggcggtcagccgccaggagtacgacaacgcccgttccaccgag
ctgcaggaccaggccgcgctgatgacggcgcagatcaacatgcgctacaccaaggtgctg
gcgcccattgatggccgcatcggccgttccagcgtgaccgaaggcgctctggtcacgagt
gcccagaccaccgccatggccaccatccagcaactggaccccatctacgtggatgtcacc
gagtcctcggccaacctgctgaaactgcgcaaggccctggccagcgggcagctgcagaaa
gccggcgacaacggtgccaaggtcaagctgaccctggaagacggcagtgccttcaatcag
gatggcactctggaattctcggaagtgtcggtggacgaaagcaccggctccgtgaccctg
cgtgccaagttccccaaccctgaccacaccctgctgcccggcatgttcgtgcacgcgcaa
ttgcaggccggtatcgccagcaccgctattctggcgccccagcagggcgtgacccatgac
ctcaagggcacccccaccgcattggtggtcaatgccgacaacaaggtcgagctgcgtgaa
ctgaaagccagccgcaccgtgggtaccgactggctgatcgaagacggcctgcacgatggc
gaccgcgtcatcaccgaaggcctgcagtacgtcaagcccggcgaaaccgtgaaggtcagc
gccgccagcaacgtcgagcctgccgccaacgcccaggccagcgtcgcggcgaagggggag
taa
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