Pseudoalteromonas sp. JSTW: GZH31_03160
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Entry
GZH31_03160 CDS
T10506
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psjs Pseudoalteromonas sp. JSTW
Pathway
psjs01501
beta-Lactam resistance
psjs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GZH31_03160
01503 Cationic antimicrobial peptide (CAMP) resistance
GZH31_03160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psjs02000
]
GZH31_03160
01504 Antimicrobial resistance genes [BR:
psjs01504
]
GZH31_03160
Transporters [BR:
psjs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GZH31_03160
Antimicrobial resistance genes [BR:
psjs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GZH31_03160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF6286
DUF3516
Motif
Other DBs
NCBI-ProteinID:
QLJ08872
LinkDB
All DBs
Position
complement(657086..660184)
Genome browser
AA seq
1032 aa
AA seq
DB search
MKITDTSVKRPVFAIVINLLLLTFGLVAFSMLPLREYPDIETPIVSVSTSYTGASAEIIE
TKITQVLENRISGIEGIKSINSSSRNGRSNITIEFNISRDIDAASNDVRERVARALDSLP
EQVRPPEVSKSNSDESPIAWFVLNSSTMDSLQLSDYAQRFIVDRLAVVDGVSNVRVGGER
KYAMKIWLNRKAMAARGITSSDIENTLRTENVELPAGEIESIDRDFTVRTARSYKDQRDF
RNLVIKRGDDGYLVRLGEVADVHLEAADDESLFRGNGRNMIGLGIVKQAKANTLTVVDNA
RAELEKIKRNLPEGTTIQDSYDSSVFIKESINEVYRTLAISMALVVLVIYLFLGSIRATL
VPAVTVPVALVGSFMFLLAMGYSINLLTLLALVLAIGLVVDDAIVMLENIHRRIELGEPP
LLAAFRGAREVGFAIIATTLVLISVFVPLVFMDGRIGALFTEFAMAVSAAVFFSSITALT
LSPALCSKVLKASEKESKFSQWMDKTFAKIEQAYRNSLASNMSRKWSLLLTMIMTGVASF
MLFQQIPSELTPKEDRGTFFIMMSGPEGASYENNAANMAKIEERLMPYSESGELSRVLIR
VPGWGGQGGVAIVGMADWDKRKRSTWEVIDEISGKMQEVTDIRAFAIMRSGIGGGGSSRP
IEFVLQGNDYDQLADWRDRIIKRAEKNPGLVRIDHDYKETFPQFLINIDKNKAADLGVSV
SDVGRTLETMLGQRRVTTFIDRGEEYDVILKGTKEDFANPTDISNIYLKSRSGELVPLDS
LITLKEEATASRLNRYNRMRAITLSANLADGYTLEEALNFLNQVAAEENDIDGAIDYKGE
SQLFYEGASAMTYVFILALTVTFLVLAAQFESFIHPLVIMLTVPLGLVGALFGLWYTDLT
LNIYSQIGIVMLIGLSAKNGILIVEFANQLRDKGVEFNEAITQAATQRLRPIIMTSLTTV
MSSVPLVLASGPGAESRMVIGVVVFTGVIVATLLTLFVVPAAYTAFARNTQSPEYLQSKL
EQQAKDKPLEEI
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattacagatactagcgttaaacgtccggtctttgcgatcgttataaacttactg
ttacttacctttggtctcgtcgctttttcgatgctaccactgcgtgaataccctgatatt
gaaaccccgattgtgagtgtaagcacatcgtatactggggccagtgcagaaattattgaa
accaaaataacccaagtgctcgaaaatcgtatttcgggtattgaagggattaaaagcatt
aattcgtcaagccgtaatggccgctcaaacatcactattgagtttaatatcagtcgcgat
atcgatgccgcatcaaacgatgtgcgtgagcgtgtagcacgtgcgcttgatagcctacca
gaacaagtacgcccacctgaggtgtcaaaatcgaacagcgatgaaagtccaatcgcttgg
tttgtcctgaatagttcgacaatggattcgttgcaactttctgactacgcacagcgtttt
attgtcgaccgtttagccgtagttgatggtgtgtcgaatgtacgtgtcggtggtgagcgt
aagtacgccatgaaaatttggctaaaccgcaaagccatggcggcacgtgggattaccagc
agcgatatcgagaataccttacgcacagaaaacgttgaacttcccgctggtgagattgaa
tcaattgaccgtgattttactgtgcgtacagcacgcagctataaggatcaacgcgacttt
agaaacctggttattaaacggggcgacgacggctacttagtgcgcctaggtgaagtggcc
gatgtgcatttagaagccgctgacgacgaaagtttattccgtggtaatggccgtaacatg
attggtttaggcattgtaaaacaagcaaaagcgaatacccttacggtagtagacaatgcc
cgcgccgaacttgagaaaataaaacgtaacctacctgaaggcaccacgattcaagacagc
tacgactcgtcagtgttcattaaagaatcgattaacgaagtgtaccgcacactcgctatt
tcaatggccttggttgtcttagttatctacttattcttggggagtattcgcgcgacttta
gtgcccgcagttactgtccctgtggcactcgttggtagctttatgttcttgcttgccatg
ggatactcaatcaacttgcttaccctactcgctttagtgttagccattggtttagtggtc
gacgatgccattgtaatgcttgaaaacattcaccgccgtatagagcttggtgagccacct
ttacttgctgcctttcgtggggcacgtgaagtaggctttgccattattgccaccacgctg
gtgcttatttcagtgtttgtgccactggtctttatggatggccgtattggcgcattgttc
acagaatttgctatggcagtgagtgcggctgtgtttttctcaagtattaccgcgctaacc
ttgtcaccagcgttgtgctcaaaggtacttaaagcctctgaaaaagaaagtaaatttagc
caatggatggataaaacatttgccaaaattgaacaggcgtatcgtaattcactagcatca
aacatgagtcgaaaatggagcttgttgctcaccatgatcatgacaggcgttgccagcttc
atgctatttcagcaaattccttcggaactgacgccaaaagaagaccgcggtactttcttt
atcatgatgagcggccctgaaggggcaagttacgaaaataacgccgctaatatggctaaa
atcgaagagcgtttaatgccatattcagagtctggtgagttgagccgtgtgctcattcgt
gtacctggctggggcggccaaggcggtgttgcaatcgttggtatggccgattgggataaa
cgaaaacgctcaacatgggaagtgatcgatgaaattagtggaaaaatgcaagaagtgacc
gacattcgagcctttgctattatgcgcagtggtattggtggcggtggctcatcacgccca
attgaattcgtattacaaggtaacgattacgaccaattagccgattggcgtgaccgcatt
attaagcgtgctgagaaaaacccaggccttgtgcgcattgaccacgactataaagagaca
ttcccacagtttttaatcaatatcgataaaaacaaagccgctgatttaggcgtgtctgta
tccgatgtaggccgcactcttgaaaccatgctaggtcaacgtcgagtgacaacctttatc
gaccgtggtgaagagtacgacgtaattctaaaagggaccaaagaagactttgctaacccg
acggatatctcaaatatctacttaaaatcacgtagtggtgaactcgtgccgctagatagc
ctcattacgctaaaagaagaagcgactgcatcacgtttaaatcgctacaaccgtatgcgt
gcgattactcttagcgccaacttagctgatggctacaccttagaagaagcactgaacttt
ttaaatcaggttgccgctgaagagaacgacattgatggcgccattgattacaaaggtgag
tctcagctgttttacgaaggtgcatcagcgatgacctatgtgttcatccttgcgctgaca
gtgacgttcttagtacttgcagcccagtttgaaagttttattcacccactggtgatcatg
ctaaccgtgccactcggtctagttggggccttatttggtttatggtacacagacttaacg
ctaaatatttacagccagattggtattgtgatgctaataggtttaagtgctaaaaatggt
atcttgattgttgaatttgcaaaccagctacgagataaaggcgttgagtttaacgaagcc
attacacaagccgctacgcagcgtttacgtcccatcattatgacctcattaacaaccgta
atgagctctgtaccgctagtactcgcaagtggtccgggtgcagaaagccgtatggtaatt
ggtgttgtggtattcaccggcgtaattgtggcaaccttactcaccttgtttgttgtgccc
gctgcgtatactgcctttgcgcgtaatacacagtcaccagagtacttacaaagtaaactg
gaacagcaagcgaaagacaaaccgttagaagaaatttag
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