Pseudoalteromonas sp. JSTW: GZH31_17010
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Entry
GZH31_17010 CDS
T10506
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psjs Pseudoalteromonas sp. JSTW
Pathway
psjs01501
beta-Lactam resistance
psjs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GZH31_17010
01503 Cationic antimicrobial peptide (CAMP) resistance
GZH31_17010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psjs02000
]
GZH31_17010
01504 Antimicrobial resistance genes [BR:
psjs01504
]
GZH31_17010
Transporters [BR:
psjs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GZH31_17010
Antimicrobial resistance genes [BR:
psjs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GZH31_17010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
QLJ10412
LinkDB
All DBs
Position
pjat527:complement(152591..155722)
Genome browser
AA seq
1043 aa
AA seq
DB search
MSRFFIDRPIFAWVLAIVVMLAGILAIKSLPVAQYPSIAPPAISIQANYPGASARTLEDT
VTQVIEQKMKGLDGLLYMSSTSESNGSATLTLTFSADTDPDIAQVQVQNKLSLATPLLPE
EVQRQGVSVAKSARNFLMVVGFVSEDGSMNNIDIGDYVSSNVLDIISRVNGVGEVQLFGS
QYAMRIWLDPSKLQKYALTPADISAAISAQNAQVSAGQLGALPAVDGQQLNATVTAQSRL
QTPEQFRDIFVKTNPDGSVVRLSDVAKVELGGENYGVVARFNGKPASGLGVKLASGANAL
DTADGVKAALAELEPFFPEGLTTVVPYDTTPFVSLSIEKVVSTLIEAVVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILQVFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
TEENLSPLEATRKSMDEIKGALVGIAMVLSAVFVPMAFFAGSTGVIYRQFSITLVTAMSL
SVLVALILTPALCATMLKPSHVHNDKSLFGRFFLGFNRGFDKTNAGAQGFVARMIKHSKR
YLLCYGLIVGGMVYIFSQLPSAFLPDEDQGILFNQVSLPAGSTTEQTLKVVEKMEHHFLE
DQSEAVKSIFTVTGFSFAGSGQNAAIGFVGLKHWDERQRPDLSVGAVAGKAMGYFSTIKE
AFVFAFPPPAVVELGTANGFTLFLQDRVGLGHDKLLEARNMFLGMAAKNPVLSGVRPNGQ
EDKPELELDIDLAKAEALGLTQTDINNTLSTAWGSRYVNDFIDRGRVKKVYLQGTPESRM
VPEDLDKWYVRNANGDMVPFTAFAHSYWTYGSPRLERYNGFSAMEIQGAAAPGYSTGQAM
VEVEKIVKQLPPGVAFEWTGISYEERLSGGQAPLLYALSLLVVFLCLAALYESWSVPAAV
MLIVPLGVFGAGVASFVFNLSNDIYLQVGLLTTIGLASKNAILIVEFAIHKMDEGMKLVD
AAIAAIRLRLRPIFMTSMAFVCGVLPLAIASSAGSGAQNALGIAVIGGTLASSTIVVLFV
PLFFVLVRRVFPGKQKVNSEEQA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgattttttattgatcggcctatttttgcatgggtacttgccatcgttgtgatg
ctggcaggtattcttgcaataaaaagtttgccggttgcgcagtatccatcaatagcgcca
cctgccattagcattcaagccaattacccaggtgcgtctgcccgtacattagaagatacg
gttacccaggttatagaacaaaagatgaaagggcttgatggcttgttgtatatgtcatca
acatcggagtctaatggttcagcaacacttacattgacttttagcgctgatacagaccct
gatatcgcccaagtacaagtacaaaacaaactgtcacttgcaacgccactgttacctgaa
gaagttcagcgccaaggtgtgtctgttgcgaaatcggcacgtaacttcttaatggttgtc
ggttttgtttctgaagacggcagtatgaataatatcgacattggtgattatgtttcatca
aatgtgctcgatattatctcgcgtgttaatggcgtaggtgaggttcagttatttggttct
caatatgcaatgcgcatttggcttgacccatcaaaactacaaaaatatgcattaacaccg
gcagatatcagtgcagcaattagtgctcaaaatgcacaagtatctgcaggtcagcttggg
gcattacctgcagtagatggccagcaattaaatgcgaccgtaacggcacaaagccgcctt
caaacgccagagcaatttagagatatattcgttaaaacgaatcctgatggttcagttgtg
cgcctaagcgatgtagcaaaggttgaattaggcggtgaaaactatggtgtggttgcgcgt
tttaacggtaaaccagcatcgggtttaggggtaaagctagccagtggtgcaaacgcactt
gatactgctgatggtgttaaagcggcacttgctgagcttgaacctttctttcctgagggg
ttaacgactgttgtaccgtatgacacaacgccttttgtctctttatcaatcgaaaaagtg
gttagtacgctaattgaagccgtggttttggtgttcttagttatgtatttattcttacag
aactttagagcgacacttattcctacaatcgctgttccggttgtattactgggtaccttt
gcgatattacaagtatttggttattcaattaataccttaaccatgttcgcgatggtgtta
gcgataggcttacttgttgatgatgctatcgttgtcgttgaaaacgtggaacgtgtaatg
acagaagaaaacctgtcaccgcttgaagcaacacgtaaatcaatggatgaaattaaaggg
gccttggtggggattgccatggtgctttctgcggtattcgttcctatggctttctttgca
ggatcgacgggcgttatttatcgtcaattctcaattacgcttgtaacagcaatgagcttg
tcggtattagtggcacttattcttacaccagcactgtgtgcgacaatgctaaagccaagc
catgtacacaatgataaatcactatttggtcgtttctttttaggcttcaaccgaggtttc
gataaaaccaatgcgggtgcgcaagggtttgttgcacgcatgattaagcacagtaaacgt
tacttactttgctatggtttgattgtcggcggcatggtgtatattttctcgcaattaccg
tctgctttcttaccagatgaagaccaaggtatattgtttaaccaagtaagcttgccagca
ggctcaaccacggaacaaacgttaaaagtggttgaaaaaatggagcatcacttcttggaa
gatcaatctgaagcagtgaaatctatctttacagtcacaggttttagctttgcgggatct
ggtcaaaatgcagcgattggctttgttggtttaaaacactgggatgaacgtcaacgtcct
gatttatcagtgggcgctgttgcgggtaaagcgatgggatacttctcaacaattaaagaa
gcgtttgtgttcgcatttccacctcctgcagttgtagaacttggtacagcaaacggcttt
accttatttttacaagaccgcgtagggcttggtcatgataagttacttgaagcacgcaat
atgtttttaggcatggcggctaaaaacccggtgctttcaggtgttcgccctaatggccaa
gaagataaaccagaacttgaactggatattgatttagctaaagcagaagcgcttggctta
acacaaactgacattaacaacacgttatcaacggcgtggggtagtcgctatgtaaatgac
tttattgaccgtggtcgtgtgaaaaaagtgtatttgcaagggactccagaatcacgcatg
gtgcccgaagacctcgataaatggtatgtgcgcaatgcaaacggcgatatggtgccattc
actgcatttgcccattcatattggacttatggctcaccacgcttagagcgctataacggc
ttctcggcgatggaaattcaaggtgccgctgcgccaggttacagtacagggcaagcaatg
gttgaggttgaaaaaatagtaaaacagcttcctccaggtgtggcatttgagtggaccggt
atatcgtatgaagagcgtttaagtgggggtcaggcaccgttactttatgcattgtcgttg
ctggttgtatttttatgtcttgcggcattgtatgaaagttggtctgtgccggctgcggtg
atgctgattgttccactgggtgtctttggtgcgggtgtagcgtcatttgtgtttaattta
tcaaacgacatttacttgcaagttggcttattaacaaccataggtttagcctctaagaat
gcaattttaattgttgaatttgcgattcataaaatggacgaaggtatgaagcttgttgat
gctgcaattgctgctattcgcttacgtttacgcccaatctttatgacgtcaatggcgttc
gtatgcggtgttttaccgcttgcgatagcatcaagtgcaggctcgggagctcaaaatgca
ctcggtattgcagtgattgggggcacacttgcttcatcaacaatcgtggtgttattcgtt
ccgttattctttgtgttagttcgtcgcgtatttcccggcaaacaaaaagtgaatagtgag
gagcaagcataa
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