Pseudomonas sp. KU43P: KU43P_04400 Help Entry KU43P_04400       CDS       T10397                                  Symbol ligB Name (GenBank) DNA ligase B   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pskp  Pseudomonas sp. KU43P Pathway pskp03030   DNA replication pskp03410   Base excision repair pskp03420   Nucleotide excision repair pskp03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pskp00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     KU43P_04400 (ligB)    03410 Base excision repair     KU43P_04400 (ligB)    03420 Nucleotide excision repair     KU43P_04400 (ligB)    03430 Mismatch repair     KU43P_04400 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pskp03032]     KU43P_04400 (ligB)    03400 DNA repair and recombination proteins [BR:pskp03400]     KU43P_04400 (ligB) Enzymes [BR:pskp01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      KU43P_04400 (ligB) DNA replication proteins [BR:pskp03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      KU43P_04400 (ligB) DNA repair and recombination proteins [BR:pskp03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      KU43P_04400 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      KU43P_04400 (ligB)    MMR (mismatch excision repair)     DNA ligase      KU43P_04400 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       KU43P_04400 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_OB DNA_ligase_aden HHH_5 HHH RNA_ligase DUF3701 Motif Other DBs NCBI-ProteinID:  BBH43963 UniProt:  A0A5K7TQK6 LinkDB All DBs Position complement(487990..489687) Genome browser AA seq 565 aa AA seqDB search MPWMLLFTLLILPILTAQAHECPPWSATRAATEAASLRKTLERWDDHYHRLGKALVADEL YDQSRQYLTHLHQCFALEGELDSLASARGPIPHPIPHTGVDKLPDETAVARWMAGKQMVW IQPKVDGVAASLIYRQGRLVKLLSRGDGLRGHDWSRHIPHLEAIPQQLSQPLDLTLQGEL YLRLPAHVQAEAGSAGARGTVAGLLARKQLDREGGARIGLFVWDWPHGPSRQAERLAQLS ALGFPDSQHYSRAIDSPEQAGEWRLHWYRSALPFATDGVILRQDSRPPAERWQVNAPYWI AAWKHPYTQALTEVRDVHFRVGRTGKITPLLMLRPVELDGRRITQVSLGSLARWQAIDAR PGDQVAISLAGLTIPRFEQVVHRAAERQPVTPPVPGQFDAHSCWEVSEGCEEQFIARLTW LSGKHGLALSGIGPGTWRRLVENGQVAAISDWLALEAEQLMSVPGISEPSARRLLNAFAA GRARPFEQWLRALGVPAPRAMPLEGDWPTLARRSAGDWQAVPGIGETRAGQLKAFFSSAT VQGIAEQLGGFDIDGFTRHNALTAQ NT seq 1698 nt NT seq  +upstreamnt  +downstreamnt atgccctggatgctgctcttcacgctgttgatactgcccattctcaccgcccaggcgcac gaatgcccaccgtggtcggccacgcgggcagccaccgaagctgccagcttgcgcaaaaca cttgaacgctgggacgaccactaccaccggctcggcaaggcgctggtggccgatgagttg tacgaccagagccgccagtacctcacgcatcttcaccaatgctttgccctggaaggcgaa ctggactcgctggccagcgctcgcggcccgataccccatccaattccccatacgggtgtc gacaagctgccggacgaaacggcagtagcgcgctggatggccggtaaacaaatggtgtgg atccagcccaaggtcgacggcgtcgctgcctcgttgatctaccgacaaggtcggctggtc aagttactcagccgcggcgacggcctacgcgggcacgactggagccgtcatattccccac ctcgaagcgatcccccagcagttgtcccagccactggacctgaccctgcaaggcgagctg tacctgcgcctgccagcgcacgtgcaggccgaagcaggcagcgcgggggcacgtggcacg gttgcggggttgctcgcccgcaagcagctggaccgtgaaggcggcgcccgcatcggcctt ttcgtctgggactggccgcacggcccatcccgccaggccgagcgcctggcgcagctgagt gcgctgggcttccccgacagccagcattacagcagagccatcgacagccctgaacaagcc ggcgaatggcggctgcactggtatcgttctgccctgcccttcgccaccgacggcgtgatt ctgcgccaggacagccgccctcccgccgaacgctggcaagtcaatgcgccctactggatc gcggcgtggaaacacccctacacccaggcgctgacagaagtgcgcgatgtgcactttcgg gttgggcgcaccggcaagatcacgccgctgctcatgcttcggccggtcgaactggatggt cgacgcatcactcaggtcagcttgggctccctggcccgctggcaggccatcgacgcgcgc ccaggggaccaggtggccatcagcctagccgggctgaccatcccgagattcgaacaggtc gtgcaccgtgcagccgagcggcaaccggtcacaccacccgtgcctggccagttcgacgcc cacagttgctgggaggtcagtgagggttgcgaagagcagttcatcgcccggctcacctgg ctcagtggcaagcatggtctggccctgtccggtatagggcctggcacctggcggcgcctg gtggagaacggccaggtggcagccatcagcgattggctggcactggaggctgaacagctc atgagcgtacctggcatcagtgaaccctcggccaggcgcctgctgaatgcattcgccgct ggccgtgcacggcccttcgaacagtggctgcgcgcgctcggcgtaccggcccctcgtgca atgccgctggagggggactggccaacgctggccaggcgctcggcgggtgactggcaagca gtgcctggaataggcgaaacacgagcagggcaactgaaggctttcttttcttcggcgact gttcagggtattgccgagcagctgggtggcttcgacatagacgggttcacccgtcacaac gcactcacggcgcaatga

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