Pseudomonas sp. KU43P: KU43P_16500 Help Entry KU43P_16500       CDS       T10397                                  Symbol ligA Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pskp  Pseudomonas sp. KU43P Pathway pskp03030   DNA replication pskp03410   Base excision repair pskp03420   Nucleotide excision repair pskp03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pskp00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     KU43P_16500 (ligA)    03410 Base excision repair     KU43P_16500 (ligA)    03420 Nucleotide excision repair     KU43P_16500 (ligA)    03430 Mismatch repair     KU43P_16500 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pskp03032]     KU43P_16500 (ligA)    03400 DNA repair and recombination proteins [BR:pskp03400]     KU43P_16500 (ligA) Enzymes [BR:pskp01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      KU43P_16500 (ligA) DNA replication proteins [BR:pskp03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      KU43P_16500 (ligA) DNA repair and recombination proteins [BR:pskp03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      KU43P_16500 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      KU43P_16500 (ligA)    MMR (mismatch excision repair)     DNA ligase      KU43P_16500 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       KU43P_16500 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia DNA_ligase_ZBD 5_3_exonuc PTCB-BRCT DUF2481 Motif Other DBs NCBI-ProteinID:  BBH45173 UniProt:  A0A5K7TU46 LinkDB All DBs Position 1810111..1812441 Genome browser AA seq 776 aa AA seqDB search MNAETRIHALRAELDQHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQR VGGAALAAFGQVRHEVPMLSLGNAFEEADLREFGRRVVDGLDQPGAVDFSCEPKLDGLAV SLLYRDGQLVQGATRGDGTTGEDISANVRTVRNIPLKLQGEGWPAVLEVRGEVFMSKAGF DRLNAAQAEAGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVGQVSASIGESHIGI LEQLKQWGLPISRELKHASGIEECLAYYRDIGERRNSLAYEIDGVVFKVNSLAAQRELGF RAREPRWAIAHKFPAMEELTEVLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNATLHNMD EIARLGLRIGDTVIIRRAGDVIPQVMQVVLERRPENARPVEVPSECPVCGSQVERTQLIK RSKGKETTSEGAVYRCVGRLACGAQLKQAIIHYVSRRAMDIDGLGEKSVEQLVDEGLIGS PADLYKLEFDQIVGLEGFAEVSSRKLLDAIDASKRPTLARFIYALGIPDVGEETAKVLAR SLGSLKRVQQALPQVLTYLPDIGLEVAHEIHNFFEDEHNRKVIEQLLACGMKLQDEGELA AEFAASTTLAGLIAKLDIASVGPTGAEKLVAKLGSLEKIIEADGIDLRQALAAKQADAVR EFFKDEANQKLARGIEAQLLAFGMHWSCEKKVAEGLPLAGQTWVLTGTLERMSRDVAKEK LESLGAKVSGSVSGKTHCVVAGPGAGSKLAKASELGVKVLDEDAFVVFLGEQGIAV NT seq 2331 nt NT seq  +upstreamnt  +downstreamnt atgaacgccgaaacccgaatccacgccttgcgcgccgaactcgaccagcacaactaccgc tattacgtgctcgacgagccgagtgtgcccgacgccgagtacgaccgtctcttcaacgaa ctcaaggcgctggaagccgagcacccgcatctggtgacccctgactcgccaacccagcgc gtcggaggggcggccttggcagccttcggccaggtgcgccacgaagtgcccatgctcagc ctgggcaacgccttcgaagaggccgacctgcgtgagttcggtcgccgtgtggtggatggc ctcgatcagcccggcgcggtcgacttcagttgcgagcctaagctcgatggccttgcggtc agcctgctgtaccgcgacggccaactggtgcagggtgccacccggggcgacggcaccacc ggtgaagacatcagcgccaatgtgcgcaccgtgcgcaatatcccgctgaagctgcaaggc gaaggctggccggccgtgctcgaagtacgcggcgaggtgttcatgagcaaggccgggttc gaccggctcaacgccgcccaggccgaagccggcggcaaaacctttgccaacccgcgcaac gccgccgctggcagcctgcgccagctcgattcgaagatcaccgccagccggccgctggaa ttctgctgctacggtgtagggcaggtgtcagccagcatcggtgaaagccatatcggcatt ctcgagcagctcaagcagtggggcctgccgatcagccgtgagctcaagcacgcctcgggt atcgaggagtgcctggcctactaccgtgacatcggcgagcgacgcaacagcctggcgtac gaaatcgacggcgtggtgttcaaggtcaatagcctggcagcccagcgtgagctgggcttc cgtgcccgtgagccgcgctgggccatcgcccacaagttcccggccatggaagagctcacc gaagtgctggatgtggagttccaggttggccgtaccggcgcggtgacccccgtggcgcgc ctcaagccggtcaaggtggcgggtgtgacggtgtccaacgccaccctgcacaacatggac gaaattgcccgcctgggcctgcgcattggcgatacggtgatcatccgccgtgccggcgac gtgatcccacaggtcatgcaggtggtgctcgagcggcgtcccgagaatgctcgcccggta gaagtacccagcgagtgcccggtgtgcggctcgcaggtcgagcgtacccagttgatcaag cgcagcaagggcaaggaaaccaccagcgaaggtgccgtgtatcgctgcgttggccgcctg gcctgtggggctcagctcaagcaagcgatcatccactacgtatctcgccgtgccatggac atcgacggcctgggcgagaagagcgttgagcagttggtggacgaaggcctgatcggctcc ccggcagacctgtacaagctggagttcgaccagatcgtcggcctggaaggcttcgccgaa gtgtcgagcaggaagctgctcgatgccatcgacgccagcaagcgcccgaccctggcgcgc ttcatctacgccctgggcatcccggacgtgggcgaggaaaccgccaaggtgctggcgcgc tcgctgggcagccttaagcgcgtgcagcaggcgctgccccaggtgctgacctacctgccg gacatcggcctggaagttgcccatgagatccacaacttcttcgaagacgagcacaaccgc aaggtgatcgagcagttgctggcgtgtggcatgaagctgcaggacgaaggcgagctggcc gccgagttcgccgccagcaccaccttggccgggttgatcgccaagctcgacatcgcctct gtcgggcctaccggggcggaaaaactggtggccaagctgggcagcctggaaaagatcatc gaggctgacggtatcgacctgcgccaggccttggcggcgaagcaggccgatgcggtgcgt gagttcttcaaggacgaagccaatcagaagctggcccgtggcatcgaggcccagttgctg gcgttcggcatgcactggagctgcgagaagaaagttgccgaaggcttgccactggcgggc cagacttgggtgctgaccggcacgctggaacgcatgagtcgcgacgttgccaaggagaag ctggagagtctgggggccaaggtgtctggatcggtgtcgggcaagacccattgcgtggtg gccggcccaggggcgggttccaaactggccaaggccagtgagcttggggtgaaggtgctg gatgaggatgcgttcgtcgtattcctgggtgagcagggcatcgcggtctga

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