Pseudomonas sp. KU43P: KU43P_42100
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Entry
KU43P_42100 CDS
T10397
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pskp Pseudomonas sp. KU43P
Pathway
pskp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pskp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KU43P_42100 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pskp03400
]
KU43P_42100 (nth)
Enzymes [BR:
pskp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KU43P_42100 (nth)
DNA repair and recombination proteins [BR:
pskp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KU43P_42100 (nth)
Prokaryotic type
KU43P_42100 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Ogg-HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BBH47733
UniProt:
A0A5K7U1J4
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All DBs
Position
4664699..4665337
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANT
PQAIYALGVAGLSEYIKTIGLYNSKAKNVIEACRLLIERHGGEVPQTREALEALPGVGRK
TANVVLNTAFRQPTMAVDTHIFRVSNRTGIAPGKTVLEVEKKLVKFVPKDYLLDAHHWLI
LHGRYVCQARKPRCGSCRIEDLCEYKQKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgccaaacgcctggagatatttcgcaggctgcacgaagacaatcccgacccg
aagacagaactggcttacaccacacctttcgaattgctggtggctgtcaccctctctgca
cagtccaccgatgtgggtgtcaacaaggctaccgcccgcctgtttccagtcgccaatacc
ccgcaagccatctatgcgctaggggtcgcaggcctgagcgaatacatcaagacaatcggc
ctttacaacagcaaggccaagaacgtcatcgaagcctgtcgcttgctgatcgagcgccat
ggtggcgaagtaccacaaacccgtgaagcgctcgaagccctcccgggcgtggggcgtaaa
acggccaatgtcgtgctcaataccgcattcagacagccaaccatggcggtggacacgcac
atttttagagtgagcaaccgcactggcatcgcacccggcaagactgtgctcgaggtggag
aagaagctggtgaagttcgtgcccaaggactacctgctcgatgcacaccattggctcatt
ctgcacgggcgctatgtctgccaggcacgcaagccccggtgcggcagttgccggatcgaa
gatttatgcgagtacaagcagaagacatctgacgattga
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