Phocoenobacter skyensis: A6B44_05330
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Entry
A6B44_05330 CDS
T06668
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
psky
Phocoenobacter skyensis
Pathway
psky00020
Citrate cycle (TCA cycle)
psky00785
Lipoic acid metabolism
psky01100
Metabolic pathways
psky01110
Biosynthesis of secondary metabolites
psky01120
Microbial metabolism in diverse environments
psky01200
Carbon metabolism
psky01210
2-Oxocarboxylic acid metabolism
Module
psky_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psky_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
psky00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A6B44_05330
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
A6B44_05330
Enzymes [BR:
psky01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
A6B44_05330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
E1_dh
Transket_pyr
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
QLB22659
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All DBs
Position
1096700..1099513
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AA seq
937 aa
AA seq
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MQTKYKNLNDWLSSSPFNGSSQSYIEDIYEQYLDDPTSIEQSWCDIFDQLPALQPDTTEQ
AHSPIRHYFRRLAKANQSNVDSVMDPKMGMKLVKILQFINAHRFRGYLEANLDPLNYYRW
KTSSVPELDYRYHGFTEADLDEEFIIGHVAYNKEKITLRELAQKLKETYCGSIGLEFMHV
QDQEQKTWLQAKMESLLQKPLFTPQERIKFLEELTAADGLERYLGAKFPGAKRFSLEGSD
AFIPMMKEIIRHASHQGISDITMGMAHRGRLNVLVNVLGKKTAELFDEFSGKHSTERTGD
VKYHQGFSSYFATDEKLMHLVLAFNPSHLEIVNPVVIGATRARQTRMNKGQDNVLAVTVH
GDSALAGQGVVQETLNMSHARGYTVGGAIRIVINNQIGFTTSNPLDTRSTEFCTDIAKMI
QAPIIHVNGDDPEAVAFASQMAVEYRSLFKRDIFIELISYRRHGHNEADEPMATQPMMYS
IIKKHPTPRKIYADRLIAEGVVTEEQVTEMVNLYRDALDNGERVVPEWRKMDKTKANWVQ
FLDHDWNTPYQSQFPADRFVTLAQKVSSYPDTITPQSRVAKIYNDRTAMAKGEKPFDWGM
AEIMAYATLLDDGTHIRLSGEDAGRGTFFHRHSVIHNQKDGSGYIPLMNIHSSQGRFEVW
DSVLSEEAVLAFEYGYAITSPRTLTIWEAQFGDFANGAQIVIDQFISSGEQKWGRMCGLV
MLLPHGYEGQGPEHSSARLERYLQLCAQHNIQVCVPSTPAQVYHMLRRQSVRKMRRPLVV
LSPKSLLRHPLAISTQEELVNGTFQNVIDEIDNIDPKNVKRVVFCSGKVYYDLLEQRRKN
QQNDVAILRIEQLYPYPMKEIVQILESYQHVTDYVWCQEEPQNQGAWYCSKHNFEDSIPA
GSTLSYAGREASASPAVGSMALHTQQQKQLVDDALTL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcagactaagtacaaaaatttgaatgattggttaagttcatcgccatttaatggttca
agccaatcttatattgaagatatttatgaacaatatctagatgatcctacttctattgaa
caaagttggtgtgatattttcgatcaactacccgcacttcaaccagatactacagagcaa
gctcactcccctattcgacattatttccgacgcttagcaaaagcaaatcaatctaatgtg
gattccgttatggatccaaaaatgggaatgaagctggtaaaaatattacagtttattaat
gctcaccgttttcgtggttatttagaagctaatcttgatcctctaaactactaccgctgg
aaaacctcctctgttcctgaattagactaccgttatcacggttttactgaagctgattta
gatgaagagtttattattgggcacgttgcttataataaagagaaaatcaccttacgagaa
ttggctcaaaagctaaaagaaacctattgtggtagtattgggcttgaatttatgcacgtt
caagatcaagagcagaaaacgtggttacaagcaaaaatggagagtcttcttcaaaaaccc
cttttcacacctcaagagcgcatcaaattcttagaagagcttaccgctgctgatggctta
gaacgttatttaggggcaaaatttcctggtgcaaaacgcttctccttagaaggtagcgat
gcgtttattccaatgatgaaagaaattatacgccacgcaagtcatcaaggcatatcagat
atcacaatgggaatggcacatcgtggtcgtttaaatgtgctagtaaacgtattaggcaaa
aaaaccgctgagctttttgatgaattttcaggaaaacattcaacagagcgaacaggagat
gtaaaatatcatcaaggattctcttcctattttgccactgatgaaaaattaatgcattta
gtactggcatttaatccatctcatttagaaattgtcaatcctgttgtcattggtgcaacg
agagcaagacaaactcgaatgaataaaggacaggataacgtcttagcagtcacagttcac
ggtgattctgctttagcaggtcaaggagtagtacaggagaccttaaatatgtctcatgct
cgtggctacactgttggtggcgctattcgtattgtgattaataaccaaattggttttacg
acttctaatccgcttgatactcgttcaactgaattttgtactgatattgcaaaaatgatt
caagcgcctattattcatgttaatggtgacgatcctgaagcagtggcatttgcttcacaa
atggcagtagaatatagatctttatttaaacgagatatttttattgaactcatttcctat
cgtcgtcatggtcataatgaagctgatgagcctatggcaacacagccgatgatgtatagc
attatcaaaaaacatccgacacctcgtaaaatttatgcggatcgattaatcgcagaaggt
gttgtcacagaagaacaagtaacagaaatggtaaatctgtatcgtgacgcactcgataat
ggtgaacgtgttgttcctgaatggcgtaaaatggataaaacaaaagccaattgggtacaa
ttccttgatcatgattggaatactccttatcaaagtcaattcccagcagatcgttttgtt
actcttgctcaaaaagtatcttcttatcctgatactattacaccacaatcaagagttgca
aaaatttataatgatcgtaccgctatggcaaagggggaaaaaccttttgactggggtatg
gctgaaataatggcttacgcaactttacttgatgatggcactcatattcgcctttcagga
gaagatgcagggcgaggcacttttttccatcgccattccgttattcataatcaaaaagat
ggttcaggctatattccattaatgaatattcattctagtcaaggtagatttgaagtatgg
gattccgttctttccgaagaagcggtacttgcttttgaatatgggtatgcaataacctct
ccaagaacattaacgatttgggaagcgcaatttggtgattttgctaatggtgctcaaatt
gtaatcgaccaatttattagctctggtgagcaaaaatggggtcgtatgtgtggcttagta
atgttactccctcacggttatgaaggacaaggacctgagcactcttctgctcgtttagag
cgttacttacaactctgtgctcagcataatatacaagtctgtgttccttcaacgcctgcg
caagtttatcatatgttacgtcgtcaatctgtgcgtaaaatgcgtcgtcctttggtggtt
ctctcaccaaaatcattattacgacaccctcttgccatctcaacacaagaggaactagta
aatggtacattccagaatgtcatcgacgaaattgataatatcgatcctaaaaatgtaaaa
cgtgttgtattttgttctggtaaggtctattacgatctcttagaacaacgccgtaaaaat
caacaaaacgatgtcgcgattcttcgtattgaacagctatatccatacccaatgaaagaa
attgttcagattctagaatcttatcaacacgttacggattatgtatggtgtcaagaagaa
cctcaaaatcaaggggcgtggtactgtagtaagcataattttgaagactctattccagct
ggatcgacattaagttatgctggtagagaagcttctgcttcacctgcagtcggcagtatg
gcactacatacacaacaacaaaaacaattggttgatgatgcattaaccctttag
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