Pirellula staleyi: Psta_3910
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Entry
Psta_3910 CDS
T01147
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
psl
Pirellula staleyi
Pathway
psl00300
Lysine biosynthesis
psl00550
Peptidoglycan biosynthesis
psl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Psta_3910
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Psta_3910
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psl01011
]
Psta_3910
Enzymes [BR:
psl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Psta_3910
Peptidoglycan biosynthesis and degradation proteins [BR:
psl01011
]
Precursor biosynthesis
Amino acid ligase
Psta_3910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Peptidase_Prp
Motif
Other DBs
NCBI-ProteinID:
ADB18564
UniProt:
D2R179
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Position
5085657..5087174
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AA seq
505 aa
AA seq
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MPDAIIPTQNFRGISLRTVLSQVQFTKGQDIVCSAISTTEVDCEPGDLFIPEAEDHTDLL
SRCQAAIERGAAAILTEQLLPLAIPQAIVPDAREALGIISHAIVGNPSAKMRTIGITGSH
GKTATAMLVASVLEAASQACGVISSLGYSDSIEQVSTKCATPRSPKLAWWMSRMVKNKAA
AAVIEMSSQGLSQRRTAGTSLDIAVLTNLRNVHTSEHGSAANYLAAKKRIFSHLKPGGLA
IINADDHRSRQLLESLACPTLTVGLHAEADISARVIDRSIAEQRFTITAGDETIQVRSRI
IGDAHVANCLSAVAVGLSLGIELSTIVRGIENVTYLPGRMQRLEVGQEFGVIVDAASTPD
TLAIALKTARRVTKGRVLLVFSASGEKNRDARPMLARVAEQGADLAVITSGNPRRESPRE
ITHQLLDGFHRPAKAHFIPTRAEAIRWALGHAQPGDCVLICGHGDRTSHLVGTHKVRHDD
REVALTWLYESGQRELAKPQLKIFG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgctatcattccgacccagaatttccgtggtatttcgctccgaaccgtactt
tcacaagtgcagttcaccaaagggcaggacatcgtttgctccgctatttcgaccaccgaa
gtcgattgcgagccaggcgatttgttcattcctgaagctgaagatcacaccgatttgctc
tcccgctgccaagcggcgatcgagcgcggtgccgcagccattctgaccgaacagctgctc
cctttggcgattccccaggcgattgttcccgacgcgcgggaagcgctcggaatcatctcg
cacgcgattgtcgggaatccctcggccaagatgcgcaccatcggcatcaccggctcgcac
ggcaaaacagccaccgccatgctcgtggcaagcgtgctcgaagcagccagccaagcgtgc
ggcgtgatttcgtcgctcggctatagcgactcgatcgagcaagtgagcaccaagtgcgcc
acaccacgttctcccaagctcgcgtggtggatgtcgcgcatggtgaaaaacaaagcagcc
gctgcggtcatcgaaatgtcgagccaaggcctttcgcagcgccgtacggccggcacttcg
ctcgatattgccgtgctgaccaacctccgcaacgtccacaccagcgagcatggctcggcg
gcaaattacctagcggccaagaagcggatcttctcgcatctcaagccgggtggattggcg
atcatcaacgccgacgatcaccgcagccgacagctgctcgaatcactcgcctgccccacg
ctcaccgtcggtttgcacgcggaagccgacatcagcgctcgtgtgatcgaccgctccatc
gccgagcaacgtttcacgatcaccgctggtgatgagacgattcaagtccgctcgcgcatc
atcggcgatgctcatgtggccaactgtttatcggctgtcgcggtgggactttcgctcggc
atcgaactctcgaccattgtgcgtggcatcgaaaatgtcacctacctgccgggtcgtatg
cagcggctcgaagtggggcaagagtttggcgtgatcgtcgatgccgccagcactcccgac
acgctggcgatcgctctgaagaccgcacggcgcgtgaccaaaggacgtgttttgctcgtg
ttttcggcctccggcgagaaaaatcgcgacgctcggccgatgctcgcgcgggtcgctgag
cagggagctgatctggcggtgatcaccagcggaaatccccgccgcgaatccccacgcgag
atcacgcatcagctgctcgacggttttcatcgacctgccaaagcccatttcattccgaca
cgtgcggaagcgattcgctgggcgcttggtcatgctcagccgggagactgcgtgctgatt
tgtggtcacggcgaccggacctcgcatctggtagggactcataaagtgcgtcacgacgat
cgcgaagtggcgctcacgtggctgtacgaaagtggtcagcgcgaactggccaaacctcag
ctgaaaatctttgggtag
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