Pseudoalteromonas sp. LC2018020214: JG479_10390
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Entry
JG479_10390 CDS
T10970
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JG479_10390 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pslc03400
]
JG479_10390 (nth)
Enzymes [BR:
pslc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JG479_10390 (nth)
DNA repair and recombination proteins [BR:
pslc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JG479_10390 (nth)
Prokaryotic type
JG479_10390 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QQM63164
LinkDB
All DBs
Position
1:2360038..2360670
Genome browser
AA seq
210 aa
AA seq
DB search
MNKEKRHQILSRLRDDNPHPVTELEYSSPFELLVAVTLSAQATDVGVNKATRKLFPVANT
PQAILDLGHDTLRDYIKTIGLFNSKAANVYKMCQILVDEHNSIVPENREALEALPGVGRK
TANVVLNTAFGWPVIAVDTHIFRVSNRTKLAMGKDVVAVEQKLEKVVPKEFKVDVHHWLI
LHGRYTCVARKPKCGSCIIEDLCEFKDKTE
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaaaacgtcaccaaatactgtcgcgcctgcgcgacgataatccgcaccca
gttactgagcttgaatattcaagcccgtttgagttactcgtagcagtaacactctcagcg
caagcaaccgatgtaggcgttaataaagccactcgaaagttgttccctgttgctaatacg
ccacaagccattttagacttaggtcacgatacactgcgtgattatataaaaaccatcggc
ttatttaattctaaagctgccaacgtgtacaaaatgtgccaaattttggtggatgaacat
aacagcatcgtgccagaaaatcgtgaagccctagaagcccttccaggcgttggccgtaaa
accgctaatgttgtactcaacacagcctttggctggcctgtaatagccgtggatacacat
atatttcgtgtatctaaccgtactaagcttgccatgggtaaagatgtagttgctgtagaa
caaaagcttgaaaaggttgtaccaaaagaatttaaagtagacgtgcatcattggctgata
ctgcacgggcgctacacctgcgtagcacgtaaaccaaagtgtggcagctgtattattgaa
gacttatgtgagtttaaagataaaacagagtaa
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