Pseudoalteromonas sp. MT33b: H3302_09725
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Entry
H3302_09725 CDS
T10969
Name
(GenBank) TraR/DksA C4-type zinc finger protein
KO
K06204
RNA polymerase-binding transcription factor
Organism
psmb Pseudoalteromonas sp. MT33b
Brite
KEGG Orthology (KO) [BR:
psmb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
H3302_09725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psmb03000
]
H3302_09725
03021 Transcription machinery [BR:
psmb03021
]
H3302_09725
03009 Ribosome biogenesis [BR:
psmb03009
]
H3302_09725
Transcription factors [BR:
psmb03000
]
Prokaryotic type
Other transcription factors
Others
H3302_09725
Transcription machinery [BR:
psmb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
H3302_09725
Ribosome biogenesis [BR:
psmb03009
]
Prokaryotic type
rRNA transcription factors
H3302_09725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-dskA_traR
Zn_ribbon_SprT
Sigma54_activ_2
Ig_Sema4F
RapA_C
Motif
Other DBs
NCBI-ProteinID:
QMW13376
LinkDB
All DBs
Position
1:2134216..2134551
Genome browser
AA seq
111 aa
AA seq
DB search
MNNTEIQTKLSAELAQVRQRLLDMLASSNQGHHQQLLSQLKDNPPSVWLEMTANNLGPEF
QILISRLEKLEAALCQIDIGQYGYCCDCEEKIDNERLIADPASQRCRHCAP
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatactgaaatccaaacaaagctatctgcggaactggcgcaggttagacaacgt
ttacttgatatgttggctagttctaatcaaggtcaccatcagcaactactctcgcaactt
aaggataacccgccttctgtttggttagaaatgacagcgaataatctcggacccgaattt
caaatattgatatctcggttagaaaaactcgaagcagcactgtgccaaattgatattggt
caatatggttattgctgtgactgtgaggaaaaaattgataatgagcgtttaattgcagac
cctgcaagccaacgctgccgacactgcgctccttaa
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