Pseudomonas sp. MM213: K5R88_15630
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Entry
K5R88_15630 CDS
T11312
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
psmd Pseudomonas sp. MM213
Pathway
psmd00300
Lysine biosynthesis
psmd00550
Peptidoglycan biosynthesis
psmd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psmd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K5R88_15630
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K5R88_15630
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psmd01011
]
K5R88_15630
Enzymes [BR:
psmd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
K5R88_15630
Peptidoglycan biosynthesis and degradation proteins [BR:
psmd01011
]
Precursor biosynthesis
Amino acid ligase
K5R88_15630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PipB2_N
Motif
Other DBs
NCBI-ProteinID:
UCP07283
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All DBs
Position
complement(3480531..3481994)
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGRDLLIRELTLDSRNVRAGDLFLAVPGGKFDGRAHIADALQRGAAAVA
YEVEGATVLPITDVPLIPVKGLAAQLSDIAGRFYGEPSRHLNLVGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGTGFYGALESGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LDQGRVTALAFDVAVMTNLSRDHLDYHGTMQAYGEAKAKLFDWNDLKCRVVNLDDDFGRQ
LAAEKRESRLITYSLLDSSAYLFCREAQFDDEGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAVGALLGLDYALDEILKVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKVLMAL
RPHAKGRLLCLFGCGGDRDRGKRPLMAEVVERLADGVLVTDDNPRTEDPAVIFDDIRAGF
TNVDKVTFVAGRGQAIAQLIASASVDDVIVLAGKGHEDYQEINGQRHDFSDLVEADRALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgagcctgaacaagattttcgcccacgctggccgcgatctgttgattcgcgaa
ctgacactggacagccgcaatgtgcgggctggcgatctgtttcttgccgttcctggcggc
aagttcgacggtcgagcgcatattgccgacgccttgcagcgcggtgctgcagccgtggcg
tatgaagtcgaaggcgcgaccgtactgccgatcaccgacgtgccactgattccggtcaaa
ggcctggcggcgcagctgtccgatatcgccgggcgtttctacggtgaaccgagccgccac
ctgaacctggtcggcgtgaccggcaccaacggcaaaaccagcgtgacccaattggttgcg
caagcactggatttgctcggccagcattgcggcattgtcggcacactgggcaccggtttc
tatggcgcgctggaaagcggcctgcacaccacgccgaacccgatcgccgtgcaagcgacc
ctcgccgacctgaaaaaggccggtgccaaagccgtggccatggaagtgtcttcccatggt
ctggatcagggccgcgtaacggcattggcgtttgatgtggcggtgatgaccaatctgtcc
cgcgatcatctggattaccacggcaccatgcaggcctacggcgaagccaaggccaagctg
ttcgactggaacgacctgaaatgccgggtggtgaacctcgacgacgatttcggccggcaa
ctggcggcggaaaagcgtgagtcgcgcttgatcacctatagcctgctcgacagcagcgcc
tacctgttttgccgcgaagcgcagttcgacgacgaaggcgtgcgcgccacgttggtcacg
ccgcaaggcgagcatcatctgcgcagcaccttgctcggtcgcttcaacctgagcaacgtc
ctggcagcggtcggcgccttgctcggtctcgactacgcgctggacgaaatcctcaaggtc
ctgccgaaactcgaaggcccggccggtcgcatgcaacgcctgggcggcggtactcaaccg
ctggtggtggtcgattacgcccacaccccggatgcgctggaaaaagtattgatggccctg
cgtccgcacgccaaaggtcgcttgctgtgcctgttcggctgcggcggtgatcgcgatcgc
ggcaagcgcccgctgatggctgaagtggtcgagcgtcttgccgacggcgtgctggtcacc
gatgacaatccgcgcaccgaagaccctgcagtaattttcgatgacatccgcgccggcttc
accaacgtggataaggtgacgttcgtcgccggtcgtggtcaggccattgcgcaattgatc
gccagtgcttcggtggatgacgtgattgtccttgccggtaaaggtcacgaggactatcag
gaaatcaacggccagcgtcatgacttctctgatctggtcgaggctgatcgcgcactgacc
gcgtgggaggtggctcatgcttaa
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