Pseudomonas sp. ML2-2023-3: V6P94_07495
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Entry
V6P94_07495 CDS
T10712
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
psml Pseudomonas sp. ML2-2023-3
Pathway
psml00300
Lysine biosynthesis
psml00550
Peptidoglycan biosynthesis
psml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psml00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V6P94_07495
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6P94_07495
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psml01011
]
V6P94_07495
Enzymes [BR:
psml01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
V6P94_07495
Peptidoglycan biosynthesis and degradation proteins [BR:
psml01011
]
Precursor biosynthesis
Amino acid ligase
V6P94_07495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WWT72493
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Position
1619129..1620592
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AA seq
487 aa
AA seq
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MSLSLNKIFPHAGHDLLIRELTLDSRNVRAGDLFLAVPGGKLDGREHIADALKRGAAAVA
YEVEGADVLPITSVPLIPVKGLAAQLSDIAGRFYGEPSRHLNLVGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGTGFYGALQSGRHTTPDPIAVQAMLADLKKAGAKAVAMEVSSHG
LDQGRVSALAFDVAVLTNLSRDHLDYHGTMEAYAAAKAKLFAWSDLRCRVLNLDDEFGRQ
LAAEKHGSRLITYSLEDSSATLYCRDATFDDDGVRATVVTAQGEHLLRSSLLGRFNLSNV
LAAVGALLGLDYALDEILAVLPKLEGPVGRMQRLGGGTKPLVVVDYAHTPDALEKVLLAL
RPHAKGKLLCLFGCGGDRDRGKRPLMAQVVERLADGVLVTDDNPRSEAPAQIFDDIRVGF
TAPQSVTFVAGRGDAIAQLIAAASAEDVIVLAGKGHEDYQEINGERHDFSDLVEAEKALN
TWEAAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgagcctgaacaagatttttcctcacgccggccacgatctgctgattcgtgaa
ttgactctcgacagtcgcaatgtgcgcgcaggtgatctgttccttgcggtacccggcggc
aagctcgatggtcgtgaacatatcgctgacgcgttgaagcgcggcgcagctgccgttgcc
tatgaagtagagggggcagatgtactgccaatcacttcggttccactgattccggtcaaa
ggtctggcggctcagctatctgatatcgccgggcgcttttatggtgagccgagccgtcac
ctcaatctggttggcgtgaccggcaccaacggtaaaaccagcgtcacccagttggtcgcg
caagcactggacctgctgggccagcactgcggcatcgtcggtacgctgggcacgggcttt
tatggcgcgctgcaaagcggtcgccacaccacgccagaccctattgccgtacaggccatg
ttggccgacctgaaaaaggccggtgccaaggctgtcgcgatggaagtttcctcccatggc
ctggatcaggggcgtgtcagcgcattggcgttcgacgttgccgtgctgaccaacctgtcc
cgtgatcacctggattaccacggcacgatggaggcttatgccgctgccaaggccaagctg
tttgcctggtcggacctgcgttgccgcgtactgaacctggatgatgagttcggtcgccag
ctggccgctgaaaagcacggttcgcgcctgatcacgtatagccttgaagacagcagtgcc
acgctgtattgccgcgatgcgaccttcgatgacgacggcgttcgtgccaccgtggtcacg
gctcaaggcgagcaccttctgcgcagttccttgctcgggcgcttcaacctgagcaacgta
ctggccgctgtaggtgccttgctgggtctggattacgcgctggatgaaattctggccgtg
ctgccgaaacttgaaggtccggtcgggcgcatgcagcgcctgggcggcggtaccaaaccg
ctggtggtggtcgactacgcccataccccggatgctctggaaaaagtattgctggctctg
cgcccacacgccaaaggcaaattgctgtgcctgttcggctgcggcggcgatcgcgatcgc
ggcaagcgtccattgatggcgcaagtggttgagcgtctggctgacggtgtgttggtcaca
gacgacaacccgcgctcagaagcgcccgcgcagatctttgatgacattcgtgttggtttt
accgcgccacaaagcgtcacctttgtcgctggtcgcggtgatgccattgctcaattgatc
gccgctgccagcgccgaagacgtgatcgtgctggccggtaaaggccatgaggactatcag
gaaatcaacggcgaacgccatgatttttctgacctggtagaagccgaaaaagccctgaat
acctgggaggctgcccatgcttaa
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