KEGG   Pseudomonas sp. ML2-2023-3: V6P94_14560
Entry
V6P94_14560       CDS       T10712                                 
Symbol
ddpX
Name
(GenBank) D-alanyl-D-alanine dipeptidase
  KO
K08641  zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
Organism
psml  Pseudomonas sp. ML2-2023-3
Pathway
psml01502  Vancomycin resistance
psml02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    V6P94_14560 (ddpX)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    V6P94_14560 (ddpX)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:psml01002]
    V6P94_14560 (ddpX)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:psml01011]
    V6P94_14560 (ddpX)
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:psml01504]
    V6P94_14560 (ddpX)
Enzymes [BR:psml01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.13  Dipeptidases
    3.4.13.22  D-Ala-D-Ala dipeptidase
     V6P94_14560 (ddpX)
Peptidases and inhibitors [BR:psml01002]
 Metallo peptidases
  Family M15: zinc D-Ala-D-Ala carboxypeptidase family
   V6P94_14560 (ddpX)
Peptidoglycan biosynthesis and degradation proteins [BR:psml01011]
 Peptidoglycan biosynthesis and degradation
  Carboxypeptidase
   V6P94_14560 (ddpX)
Antimicrobial resistance genes [BR:psml01504]
 Gene sets
  Vancomycin resistance modules
   Vancomycin resistance, D-Ala-D-Lac type [MD:M00651]
    V6P94_14560 (ddpX)
SSDB
Motif
Pfam: Peptidase_M15 VanY
Other DBs
NCBI-ProteinID: WWT69300
LinkDB
Position
complement(3177583..3178134)
AA seq 183 aa
MNQCVANPSPLVEIDVEQYQVQIEMIYATADNLAGKIIYPTARCQLHRDAAVCLRKASQL
ANLAGYSLLIYDAYRPPYAQFLLWEALPNGDYVRDPHLGSHHSRGVAVDLTLVDDNGQPL
DMGTAFDAMEDKSHQFYPDLPVNVQRNRLLLLGIMLGAGFQAIPTEWWHFELPNADDYPL
LHE
NT seq 552 nt   +upstreamnt  +downstreamnt
gtgaaccaatgcgttgccaacccaagcccgctcgttgaaatcgatgtcgagcagtaccag
gtgcagatcgaaatgatctacgccactgccgacaacctggccggcaaaatcatctacccg
acggcccgttgccagttgcaccgcgatgcagccgtctgtttgcgcaaggccagccagctg
gcgaatctggcgggctacagcctgctcatctatgacgcctatcgcccgccctatgcccag
tttttgctatgggaggcattgcccaacggcgactacgtgcgcgatccgcatctgggctct
caccacagtcgcggtgttgccgtggacctgacccttgtggacgacaacggccagccgctg
gacatgggcaccgcgttcgacgcgatggaagacaagtcccaccagttctaccccgacctg
ccggtcaacgtgcagcgcaatcgcctgctgttactgggcatcatgctgggcgcgggcttc
caggcgatccctacggagtggtggcatttcgagctgcccaacgcagacgattaccccttg
ctccacgagtaa

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