Pseudomonas sp. ML2-2023-6: V6L79_07320
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Entry
V6L79_07320 CDS
T10713
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz00300
Lysine biosynthesis
psmz00550
Peptidoglycan biosynthesis
psmz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V6L79_07320
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6L79_07320
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psmz01011
]
V6L79_07320
Enzymes [BR:
psmz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
V6L79_07320
Peptidoglycan biosynthesis and degradation proteins [BR:
psmz01011
]
Precursor biosynthesis
Amino acid ligase
V6L79_07320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WWT67761
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Position
1578464..1579927
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AA seq
487 aa
AA seq
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MSLSLNKIFPHAGHDLLIRELTLDSRNVRAGDLFLAVPGGKLDGREHIADALKRGAAAVA
YEVDGADVLPISAVPLIPVKGLAAQLSDIAGRFYGEPSRHLNLVGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGTGFYGALQSGRHTTPDPIAVQAMLADLKKAGAKAVAMEVSSHG
LDQGRVSALAFDVAVLTNLSRDHLDYHGTMEAYAAAKAKLFAWPDLRCRVLNLDDQFGRQ
LASEKHDSRLISYSLEDSSATLYCRDATFDDDGVRATVVTAQGEHLLRSALLGRFNLSNV
LAAVGALLGLDYALDEILAVLPRLEGPVGRMQRLGGGSKPLVVVDYAHTPDALEKVLLAL
RPHAKGKLLCLFGCGGDRDRGKRPLMAQVVERLVDGVLVTDDNPRSEAPAQIFDDIRVGF
VAPQNVTFVAGRGDAIAQIIAGASVEDVIVLAGKGHEDYQEINGERHDFSDLVEAEKALN
SWEAAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgagtctgaacaagattttccctcacgccggtcacgatctgcttattcgtgag
ttgaccctcgacagtcgcaacgtgcgcgcaggtgatttgttccttgcggtgcccggcggc
aagctcgatggccgtgaacatatagctgatgctttgaagcgcggcgctgctgcggtggcc
tatgaagtggacggtgctgatgtactgcctatctcggcagttccgctgattccggtaaaa
ggcctggcggcccagttgtcggatattgccgggcgtttttatggcgagccaagccgtcac
ctcaatctggttggcgtgaccggcaccaacggcaagaccagcgtcactcagctggtggcg
caagcgcttgacctgctgggtcagcactgcggcatcgtcggcacattgggcactggcttt
tatggtgcgctgcaaagcggtcgccataccacgccggacccaattgctgttcaggccatg
ttggccgatctgaaaaaggccggggccaaggcggttgccatggaggtttcctcccatggt
ctggatcagggccgggtcagtgcattggcgttcgacgtcgcggtgctgaccaacctgtcc
cgcgaccacctggattaccacggcacgatggaggcttacgccgccgccaaagccaagctg
tttgcctggccggatttgcgttgccgggtgctgaatctggacgaccagttcggtcgccaa
ctggcctctgaaaagcacgactcgcgcttgatcagctacagccttgaagacagcagcgct
acgttgtattgccgcgatgcgactttcgatgacgacggcgtgcgcgccacggtggtgact
gcccaaggtgagcaccttctgcgtagcgccttgctcggacgcttcaacctgagcaacgtg
ctggccgctgttggcgccttgttggggttggattacgcactggacgaaattctcgccgtg
ctgccaaggctggaaggtccggtcggccgcatgcagcgtctgggcggcggcagcaaaccg
ctggtggtggtcgactatgcccacaccccggacgcgctggaaaaagtattgctggcgctg
cgccctcatgccaaaggcaagctgctgtgcctgttcggctgtggcggcgaccgtgatcgc
ggcaagcgtccgttgatggcgcaagtggttgagcgtttggttgacggggttttggtcact
gacgacaacccacgttcagaagccccggcgcaaatttttgatgacatccgtgttggcttt
gttgcgccgcagaacgtcacgtttgtggcaggtcgcggtgatgccatcgctcaaatcatt
gccggtgccagcgtcgaagacgtgatcgtgctggcaggtaaaggtcacgaggactatcag
gaaatcaacggcgaacgccacgacttctctgatctggtcgaagccgaaaaagcgctcaat
agctgggaggcggctcatgcttaa
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