Pseudomonas sp. ML2-2023-6: V6L79_08325
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Entry
V6L79_08325 CDS
T10713
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6L79_08325 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psmz03400
]
V6L79_08325 (nth)
Enzymes [BR:
psmz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V6L79_08325 (nth)
DNA repair and recombination proteins [BR:
psmz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V6L79_08325 (nth)
Prokaryotic type
V6L79_08325 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
DUF4817
Motif
Other DBs
NCBI-ProteinID:
WWT67949
LinkDB
All DBs
Position
complement(1803707..1804345)
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AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRFHEDNPEPKTELAYSSPFELLIAVILSAQATDVSVNKAMAKLFPVANT
PEAIYALGVDGLSQYIKTIGLYNSKAKNVIETCRLLIERHGSQVPQTREELEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTAIAPGKNVVEVEKNLMKHVPKPYLLDAHHWLI
LHGRYVCQARKPRCGSCRIEDLCEFKEKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcaaagcgccttgaaatatttcgccggtttcacgaagacaaccctgagccc
aaaacagagctggcctactcatctccgtttgagctgttgattgcggtaattttgtccgct
caagccactgacgtaagcgtcaacaaggcaatggccaaattgtttccagtcgccaataca
ccagaagccatctacgctctgggagtagatgggctgtcgcagtacatcaagaccattggc
ttgtataacagcaaggccaaaaacgtgattgaaacctgccgtttattgattgaacgtcat
ggcagtcaggttccgcagacgcgagaagagcttgaggcgcttcctggtgtaggccgcaaa
actgcaaatgtcgttctcaacacagccttcagacagctgacaatggctgtagacacccat
attttcagggtcagcaaccgaaccgcaattgcgccaggcaagaatgtggtggaagtagaa
aagaacctgatgaagcacgtacccaaaccgtatctgctggacgcccatcactggctcatc
ctgcatgggcgctacgtctgccaggcgcgcaagcctcgttgtggaagctgtcgcatagaa
gacctgtgcgaattcaaggaaaaaacctctgatgattga
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