Pseudomonas sp. ML2-2023-6: V6L79_15750
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Entry
V6L79_15750 CDS
T10713
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz01501
beta-Lactam resistance
psmz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6L79_15750
01503 Cationic antimicrobial peptide (CAMP) resistance
V6L79_15750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psmz03036
]
V6L79_15750
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psmz02000
]
V6L79_15750
01504 Antimicrobial resistance genes [BR:
psmz01504
]
V6L79_15750
Chromosome and associated proteins [BR:
psmz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
V6L79_15750
Transporters [BR:
psmz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
V6L79_15750
Antimicrobial resistance genes [BR:
psmz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6L79_15750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
Beta-barrel_RND
BSH_RND
BSH_CzcB
YknX_C
BSH_CusB
Beta-barrel_YknX
INV_N
RND-MFP_C
LcnD_C
Anemone_cytotox
Motif
Other DBs
NCBI-ProteinID:
WWT64765
LinkDB
All DBs
Position
3450876..3452072
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AA seq
398 aa
AA seq
DB search
MADVKTASPLPPEPSAPGGPRKRRLWRPMLIMVGVVLVIVAIIAGVKFTQISALIAQSKV
PLPASVVTAMHVPFDDWQPSVSAVGSMKAVRGVDVTTEVGGIVRTIGFKPGQEVAAQTLL
VQLNADSDIALLHSLEATADLAVIVLKRDKAQLAVNAVSQAQVDTDSADLKAKLAAAEQQ
RALVAKKTIRAPFAGRIGITSVNPGQYLNPGDKIATLQTFDPIYIDFTVPQTQLEEIAIG
QKVAVTADGLSNQTFTGRISTIDTQFDSTTRNVTVEANVENPKQSLVPGMFARAIVESGT
PQRYLTAPQTSVTYNPYGTTVFIATPHTNDKGEEVLTAQQAFIKTGPTRGDQVAILSGVK
EGDLLITSGQMKLKNGSPVQINNNAAPLNDPAPTPQEH
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtcaagactgcctctcccctgccacccgagcccagcgcaccgggcgggcca
cgtaaacgtcggttgtggcggccgatgctgatcatggtcggagtggtactggtgattgtg
gcgatcattgccggggtcaaattcacccagatttcagcgctgatcgcacagtcgaaggtg
cccttgcccgcctccgtggtgacggccatgcacgtgccgttcgacgactggcaacccagt
gtctctgccgtgggatcgatgaaggcagtaagaggggttgatgtaaccaccgaagtgggc
ggcattgtgcgcaccatcggcttcaagcccggacaagaagttgcggcacagacgctgctc
gtgcagttgaacgccgactcggacatcgcgctactgcactcgcttgaggccactgccgac
ctggcagtcatcgtcctcaagcgcgacaaggcccaactcgcggtgaacgccgtgtcgcaa
gcccaagttgacactgacagcgccgacctgaaggccaagctcgccgctgcggaacaacaa
cgggcgttagtagcgaaaaaaaccattcgcgcaccgtttgccggacgtatcgggattacc
agcgtcaaccccggtcaataccttaaccccggcgacaaaatagccacgctgcaaaccttt
gatccgatctacatcgacttcaccgtgccacagacccagctggaggaaattgccattggc
caaaaggtcgcggtgaccgctgatggcctctccaatcaaaccttcacggggcgaatcagc
accatcgacactcagttcgactcaaccacgcgcaacgtcaccgtagaagcgaacgtcgag
aatcccaaacaaagcctggtgcccggaatgtttgcccgggccatcgtcgagtccggtacg
ccacagcgctacctcaccgctccgcagacgtcggtcacctacaacccttacggcaccacg
gtttttatcgccacaccgcacaccaacgacaagggtgaagaagtgctgacggcgcaacaa
gccttcatcaagaccgggcctacccgtggcgaccaggtcgccatcctgtccggcgtgaag
gaaggcgacctgttgatcaccagcggccagatgaagctcaaaaacggctcgccggtgcag
atcaataacaacgccgccccgctgaacgaccccgcaccgaccccacaagaacactaa
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