Pseudarthrobacter sp. NIBRBAC000502770: NIBR502770_02970
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Entry
NIBR502770_02970 CDS
T11331
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
psnb Pseudarthrobacter sp. NIBRBAC000502770
Brite
KEGG Orthology (KO) [BR:
psnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psnb03009
]
NIBR502770_02970 (rlmC)
Enzymes [BR:
psnb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
NIBR502770_02970 (rlmC)
Ribosome biogenesis [BR:
psnb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NIBR502770_02970 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_11
Methyltransf_ANTKMT
UPF0020
Cons_hypoth95
SaeA_1st
Motif
Other DBs
NCBI-ProteinID:
QDG87565
LinkDB
All DBs
Position
complement(557723..558850)
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AA seq
375 aa
AA seq
DB search
MRCSYFDAGTCRSCTHMGRPYGEQLAGKQLHCQTLLAGHTELEWLEPVASQESGFRNKAK
MVIGGTAQNPTIGILDADGHGVDLRKCGVCSPGLRAVFPVLATYIRRLRLTPYDVPKRTG
ELKHVIITESPAGEVMLRLVLRSEQTLPRIRKHLPELLADLPQVKVVSVNLLPEHKAVLE
GDREILLTEQSTLEMRVNDINLHLRPQSFFQTNTGMAAALYRQGREWVNELAPASVWDLY
CGVGGFALHSAAPSRTVTGIETSSEAIASARLSSDEAGLAGMEFQAGDATAFALAAERSP
DLVIVNPPRRGIGKELCGWLESSDVQHVVYSSCNAQSLARDLAALPSFTARRARVLDMFP
QTTHYEVMVLLQRTA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgttcctactttgatgccggcacctgccgctcctgcacccacatgggcaggccg
tacggcgaacagctggccggcaagcagctgcactgccagaccctcctcgccggacacacg
gaactggagtggctggagcccgtggccagccaggagtccggcttccgcaacaaagccaag
atggtgatcggcgggacggcacaaaaccccaccatcggaatcctcgacgctgacgggcac
ggcgtggacctgcgcaaatgcggcgtttgctcccccggcctgcgcgccgtcttcccggtg
ctggccacctacatccgccgcctccgcctgaccccctacgacgttccgaaacgcaccggg
gaactcaagcacgtcatcatcaccgagtcccccgccggtgaggtgatgctccgcctggtc
ctccgctccgagcagaccctgccacggatccggaagcacctccccgaactcctggccgac
ctgccgcaggtcaaggtggtctccgtcaacctgctcccggagcacaaagcggtgctcgaa
ggcgaccgcgagatcctgctgacggagcagtccaccctggagatgcgggtcaatgacatc
aacctgcacctgcggccgcagagcttcttccagaccaacaccggcatggccgcggccctg
taccggcaggggcgggagtgggtcaacgagctggcgccggcctcggtgtgggacctgtac
tgcggcgtgggcggtttcgcgctgcacagcgctgccccgtcccgtacagtcaccggcatc
gagaccagcagcgaggcgatcgcctcggcccggctcagcagtgacgaggctggcctggca
ggcatggagttccaggccggcgacgccaccgcgttcgccctcgcggcggagcggtcaccg
gacctggtgatcgtgaacccgccgcggcgcggcatcggcaaggagttgtgcggctggctg
gagtcctcggacgtgcagcacgtggtgtactccagctgcaacgcccagtcgctggcccgt
gacctggccgcgctcccttcctttaccgcccggcgtgcccgtgtcctggacatgttcccg
cagaccacgcactacgaggtcatggtgctgctgcaacggacggcctag
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