Pseudomonas sp. NC02: C0058_08460 Help Entry C0058_08460       CDS       T10251                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism psnc  Pseudomonas sp. NC02 Pathway psnc03030   DNA replication psnc03410   Base excision repair psnc03420   Nucleotide excision repair psnc03430   Mismatch repair Brite KEGG Orthology (KO) [BR:psnc00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     C0058_08460    03410 Base excision repair     C0058_08460    03420 Nucleotide excision repair     C0058_08460    03430 Mismatch repair     C0058_08460  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:psnc03032]     C0058_08460    03400 DNA repair and recombination proteins [BR:psnc03400]     C0058_08460 Enzymes [BR:psnc01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      C0058_08460 DNA replication proteins [BR:psnc03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      C0058_08460 DNA repair and recombination proteins [BR:psnc03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      C0058_08460    NER (nucleotide excision repair)     GGR (global genome repair) factors      C0058_08460    MMR (mismatch excision repair)     DNA ligase      C0058_08460   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       C0058_08460 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia DNA_ligase_ZBD 5_3_exonuc PTCB-BRCT DUF4796_N Motif Other DBs NCBI-ProteinID:  AUO22022 LinkDB All DBs Position 1815917..1818274 Genome browser AA seq 785 aa AA seqDB search MTAAHTRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPELVTRDSPTQ RVGSAALSAFTQVRHEIPMLSLGNAFDESTMLEFDRRVTEGLDLPVGDLFGGGAAVEYSC EPKLDGLAVSLLYQDGELVRGATRGDGTTGEDISVNVRTVRNIPLKLHGTGWPATLEVRG EVFMSKAGFERLNATQLEVGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVTTDIS DTHIGNLQQLKKWGMPISHELKLAKGIQDCLDYYRDIGERRNALPYEIDGVVFKVNSIAY QRELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNA TLHNMDEVARLGLMIGDTVIIRRAGDVIPQVVSVVTERRPENARAVQIPESCPVCGSHVE RTQLVKRSKGKETVSEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIDGLGDKTIEQLVD EKLIGSPADLYKLKYEQIIDLEGFADVSSKKLIASIENSKTPTLARFIYALGIPDVGEET AKVLARSLASLERVQQALPEVLTYLPDVGLEVAHEIHSFFEDSHNQDVIGALIAKDECGL ELQEQGDLSAEFAASTTLGGLLDKLHVPSVGPGAAQKLADKFGSLEGVIKADWLDMRQAL PEKQAKAVRDFFDIEENARRALAIEQQLKDFGMHWQSEKKVVEGLPEAGHTWVLTGSLEL MSRDVAKEKLESLGAKVAGSVSAKTHCVVAGPGAGSKLAKATELGLKVLDEEAFVAFLAK HNITV NT seq 2358 nt NT seq  +upstreamnt  +downstreamnt atgaccgccgcccacacccgcatcctcgaactgcgcgctgaactggatcagcacaactac cgttaccacgtcctcgacgagccgagcattccggacgccgagtacgaccgtttgttccac gagctcaaggcgcttgaagccgagcacccggagctggtaacccgtgattcaccgacgcag cgggtcggcagtgcggcattgtctgcgttcactcaggtacgccacgaaatcccgatgctc agcctcggcaacgcctttgatgaaagcaccatgctggaattcgatcgccgggtcactgaa ggcctggacctgcccgtgggcgacctgtttggcggtggcgcagcggtggagtacagctgc gagccgaagctcgatggcctggcggtcagcctgctgtatcaggacggtgagctggtgcgt ggcgccacccgtggcgatggcaccactggcgaagacatcagcgtcaacgtgcgtaccgtg cgcaacattcctttgaaactgcacggcaccggctggccggcgaccctcgaagtgcgcggc gaagtattcatgtccaaggccggtttcgagcggctgaacgccacccagctggaagttggc ggcaagactttcgccaacccgcgcaacgcggcggcgggtagcctgcgtcagctggactcg aagatcaccgccagccgtccgctggaattctgctgctatggcgtgaccacggatatcagc gacacccacatcggcaacctgcaacagctgaagaagtggggcatgcccatcagccatgag ctgaagctggcaaaagggattcaggattgcctcgactactaccgcgatatcggtgagcgc cgcaacgccttgccctatgaaatcgacggcgtggtgttcaaggtcaacagcattgcctac cagcgggagctgggcttccgtgcccgcgagccgcgctgggcaattgcccataaattcccg gccatggaagagctgaccgagctgcttgacgttgaattccaggtcggccgcaccggcgct gtgacacccgtggcacgcttgaaaccggtcaaggtcgcgggtgtgaccgtgtccaacgcc acactgcacaacatggacgaggtggcacgcctgggcctgatgatcggcgacacggtgatc atccgccgtgccggtgatgtgattccccaagtggtatcggtggtgaccgagcgccgcccg gaaaacgcccgtgcggtgcagatccccgagagctgcccggtgtgcggctcccacgttgag cgtacgcaactggtcaagcgcagcaagggcaaggaaaccgtcagtgaaggcgcggtgtac cgctgcgtcgggcgcctggcctgtggtgcgcagctcaagcaggcgatcatccatttcgtt tcgcgccgggccatggacatcgatggcctgggcgacaagaccatcgagcaactggtggac gaaaaactcatcggctcgccggcggatctctacaagctcaagtacgaacagatcatcgac ctggaaggttttgccgacgtttccagcaagaagctgattgcctctattgaaaacagcaag acgccaaccctcgcacggtttatctacgctctgggcattcccgatgtgggcgaggagacg gccaaggtgctggcgcgctcgctggcatccctggagcgcgtgcagcaggccttgccggaa gtgctgacgtacttgccggacgttggcctggaagtggcccacgagattcacagcttcttt gaagacagccataaccaggatgtgattggcgccctgatcgcgaaggacgagtgcggcctg gagttgcaggagcagggcgacctgagcgccgagtttgcggccagcaccacgttgggcggc ttgctcgacaagctgcacgtgccgtccgtgggcccgggcgccgcgcagaaactcgccgac aaattcggctccctcgaaggcgtgatcaaggccgactggctcgacatgcgccaggctttg ccggagaagcaggccaaggccgtccgggacttttttgatattgaagaaaacgcccggcgc gcgctggccatcgagcaacagctcaaggacttcggcatgcactggcagagtgagaagaaa gtcgtcgaaggcttgcccgaggccggtcacacctgggtgctcaccggctccctggaactg atgagccgcgatgttgccaaggaaaaactcgaaagcctgggcgccaaggtggcgggctcg gtgtcggcgaaaacccactgcgtggtcgccgggccgggcgcgggttcgaagctggccaag gccactgagctgggcttgaaagtgctggatgaagaggcgttcgtggcatttttggccaag cacaacatcacggtctga

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