Pseudomonas sp. NC02: C0058_24350
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Entry
C0058_24350 CDS
T10251
Name
(GenBank) HAMP domain-containing protein
KO
K07637
two-component system, OmpR family, sensor histidine kinase PhoQ [EC:
2.7.13.3
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc01503
Cationic antimicrobial peptide (CAMP) resistance
psnc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C0058_24350
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
C0058_24350
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psnc01001
]
C0058_24350
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psnc02022
]
C0058_24350
01504 Antimicrobial resistance genes [BR:
psnc01504
]
C0058_24350
Enzymes [BR:
psnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
C0058_24350
Protein kinases [BR:
psnc01001
]
Histidine kinases
OmpR family
C0058_24350
Two-component system [BR:
psnc02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
C0058_24350
Antimicrobial resistance genes [BR:
psnc01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
C0058_24350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HATPase_c_2
PhoQ_Sensor
HAMP
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AUO24950
LinkDB
All DBs
Position
complement(5211584..5212930)
Genome browser
AA seq
448 aa
AA seq
DB search
MIRSLRVRLMLAATILAVLFMLALLPAMQGAFSLALQDSIEQRLASDVTTLISAARVENN
RLLMPAQLPDERFNLTDSRLLGYIYDREGHLVWRSRATQEENINYKPRYDGRGNEFARIR
EANGQEFFVYDVEVKLLGGKSAAFSIVALQPVREYQLTLEGLRENLYLGFGAALLVLLTL
LWLGLTWGLQALRRLSQELDEIEGGTRESLSEQHPRELLRLTGSLNRLLHSEREQRTRYR
DSLDDLAHSLKTPLAVLQGVSEDMAQRPEDRDQAWVLQSQIERMSQQISYQLQRASLRKS
GLVRHQVRLEPVLQSLCDTLDKVYRDKGVKVAFELPDECDVPIEKGALLELLGNLLENAY
RLCLSEVRITLQESLEGTELCIEDDGPGVPPDQRARILQRGERLDRQHPGQGIGLAVVKD
IIESYGARLTLGDSPLGGAAFKIHFPAV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgattcgctcgctacgtgtacgtttgatgctcgcggccaccatcctggccgtgctgttt
atgctggccttgttgccggccatgcagggcgccttcagcctggccctgcaggactccatc
gagcagcgcctggcgtcggatgtcaccacgctgatttcggctgcccgggttgaaaacaat
cgcctgctgatgcccgcgcagctgccggacgagcgtttcaacctcaccgacagccgcctg
ctgggctacatctatgaccgcgaaggccatctggtctggcggtcgcgcgccacccaggaa
gaaaacatcaactacaagccgcgctatgacgggcgcggtaacgaatttgcgcggatccgc
gaggccaacggccaggaattttttgtctatgacgtcgaggtcaagctgctgggcggcaag
agcgcggcgttcagtatcgtcgccctgcaaccggtgcgtgaataccaactgaccctcgaa
ggcctgcgggaaaacctctacctgggcttcggcgccgccttgctggtgctgctgaccctg
ttgtggctgggcctgacctggggcctgcaggcgctgcgccggctgagccaggaactggat
gaaatcgaaggcggtacccgggaaagcctcagcgagcaacacccgcgcgagctgctgcgc
ctgaccggctccctgaaccggttgctccacagcgagcgggagcaacgcacccgttaccgc
gattccctggatgacctggcccacagcctgaaaaccccgttggcggtgttgcaaggcgtg
agtgaagacatggcccagcgccccgaagatcgggaccaggcctgggtactgcaatcgcag
atcgaacgcatgagccagcagatcagctaccaattgcagcgcgccagcctgcgtaaaagc
ggcctggtgcgccaccaggtgcggctggagccggtgctgcaaagcctgtgcgacacgctg
gacaaggtttatcgcgataagggcgtgaaggtcgcctttgaactgccggacgaatgcgac
gtgccgatcgagaagggcgccttgctggaactgctcggcaacctgctggagaacgcctac
cgcctgtgcctgagcgaagtgcgcatcaccttgcaggaaagcctggagggcaccgagttg
tgcatcgaagacgatggccccggcgtgccgccggaccagcgtgcgcgcatcctgcagcgg
ggcgagcggctcgaccgccagcatccggggcaggggattggcctggcggtggtcaaggac
atcattgaaagctatggcgcccggctgacccttggggattcaccgctgggtggggctgcg
ttcaagatccacttcccggctgtttga
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