KEGG   Pseudomonas sp. NS1(2017): CI807_29150
Entry
CI807_29150       CDS       T11105                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
psns  Pseudomonas sp. NS1(2017)
Pathway
psns03030  DNA replication
psns03410  Base excision repair
psns03420  Nucleotide excision repair
psns03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:psns00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CI807_29150
   03410 Base excision repair
    CI807_29150
   03420 Nucleotide excision repair
    CI807_29150
   03430 Mismatch repair
    CI807_29150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psns03032]
    CI807_29150
   03400 DNA repair and recombination proteins [BR:psns03400]
    CI807_29150
Enzymes [BR:psns01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CI807_29150
DNA replication proteins [BR:psns03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CI807_29150
DNA repair and recombination proteins [BR:psns03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CI807_29150
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CI807_29150
   MMR (mismatch excision repair)
    DNA ligase
     CI807_29150
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CI807_29150
SSDB
Other DBs
NCBI-ProteinID: ASV40101
UniProt: A0A223VXK5
LinkDB
Position
complement(6272280..6274637)
AA seq 785 aa
MTAAHTRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPDLVTRDSPTQ
RVGSAALSAFSQVKHEIPMLSLGNAFDETTMLEFDRRVTEGLDLPAGDLFGGGAVVEYSC
EPKLDGLAVSLLYQDGELVRGATRGDGTTGEDISVNVRTVRNIPLKLHGSGWPATLEVRG
EVFMSKAGFERLNASQLEVGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVTTDIS
DTHIGNLQQLQKWGMPISHELKLAKGIQDCLDYYRDIGERRNSLPYEIDGVVFKVNSIAS
QRELGFRAREPRWAIAHKFPALEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNA
TLHNMDEVARLGVMIGDTVIIRRAGDVIPQVVSVVLERRPENARAVPIPESCPVCGSHVE
RTQLVKRSKGKETVSEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIDGLGDKTIEQLVD
EKLIGSPADLYKLKYEQIIDLEGFADISSKKLITAIENSKSPTLARFIYALGIPDVGEET
AKVLARSLASLERVQKALPEVLTYLPDVGLEVAHEIHSFFEDSHNQDVIGALLSPQECGL
QLQDQGDLSAEFAASTTLGGLLDKLHVPSVGPGAAQKLADKFVTLEGVIKADWLDMRQAL
PEKQAKAVREFFDNADNASRALAIEQQLKDFGMHWNSEKKVVEGLPEAGHTWVLTGSLEL
MSRDVAKEKLESLGAKVAGSVSAKTHCVVAGPGAGSKLAKASELGLKVLDEEAFVAFLAK
HNITV
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgaccgccgcccacacccgcatcctcgaactgcgcgctgaactggatcagcacaattac
cgctaccacgtcctcgatgagccgagcattccggatgccgagtacgaccggctgttccat
gagctcaaggcactggaagccgagcacccagacctggtcacgcgcgactccccgacgcag
cgggtcggcagtgcggcgttgtcggcgttctcccaggtcaagcatgagatccccatgctc
agcctcggcaacgcctttgacgaaaccaccatgctggaattcgatcgtcgggtcaccgaa
ggcctcgacctgccggccggcgatctgtttggcggtggcgcggtggtggaatacagctgc
gaaccgaagctggatggcctggcggtcagcctgctgtatcaggacggtgagctggtacgc
ggcgccacccgtggcgacggcaccaccggtgaagacatcagcgtcaacgtgcgcaccgtg
cgcaatatcccgttgaaactgcacggcagcggctggccggcgaccctggaagtgcgtggc
gaagtgttcatgtccaaggccggtttcgagcggctcaacgcctcgcaactggaagtgggc
ggcaagactttcgccaacccgcgcaacgccgctgctggcagcctgcgtcagttggattcg
aagatcaccgccagccgacccttggaattctgctgctacggcgtgaccactgatatcagc
gacacccacatcggcaacctgcaacagttgcagaaatggggcatgcccatcagccatgag
ctgaagctggccaagggcatccaggattgcctggactactaccgcgatattggcgagcgc
cgtaacagcctgccgtatgagatcgacggcgtggtgttcaaggtcaacagcatcgcctcg
cagcgtgaactgggtttccgtgcccgcgaaccacgctgggccatcgcccacaaattccct
gccttggaagagctgactgaattgctcgacgtggagttccaagtcggccgtaccggcgcc
gtcacgccggtggcgcgccttaaaccggtcaaggtcgcgggtgtcaccgtgtccaacgcc
accttgcacaacatggatgaagtggcgcgcctgggcgtgatgatcggcgataccgtgatt
atccgccgcgctggggatgtgatcccacaagtagtttcggtggtgcttgagcgccgcccg
gaaaatgcccgtgcggtgccgatccccgagagctgcccggtgtgtggttcccacgtggag
cgcacgcaactggtcaagcgcagcaagggcaaggaaaccgtcagcgaaggcgcggtgtac
cggtgcgtcgggcgtctggcttgtggcgcgcagctcaagcaggcgatcatccatttcgtc
tcgcgccgcgccatggacattgatggcctgggtgacaagaccattgagcaattggtcgat
gaaaagctcatcggctcaccggccgacctctacaagctcaagtacgaacagatcatcgac
ctggaaggctttgccgacatttccagcaagaagctgatcaccgccatcgaaaacagcaaa
tccccgaccctggcgcgctttatctacgcccttggcattcccgacgtcggcgaggagacc
gccaaggtgctggcgcgctccctggcctccctggagcgcgtgcagaaggccttgccggaa
gtgttgacgtacttgccggacgtgggcctggaagtggcgcatgagattcatagtttcttt
gaagacagccataaccaggacgtgatcggcgcgctgctgtcgccgcaggagtgcggcctg
caactgcaggatcagggcgacctgagtgctgaattcgccgccagcaccaccctgggcggg
ttgctcgacaagctgcacgtaccgagcgtcggcccgggcgctgcgcagaagctggcagac
aagttcgtcaccctcgaaggcgtgatcaaggccgactggctggacatgcgccaggccctg
cccgagaaacaagccaaggctgtgcgcgagttcttcgataacgccgacaacgccagccgc
gccctggccattgagcagcagctcaaagacttcggcatgcattggaacagcgagaagaaa
gtcgtcgaaggcttgccggaggcggggcatacttgggtgctcactggctccctggagctg
atgagccgcgacgtggccaaggaaaaactcgaaagcctcggcgccaaggtggcgggttcc
gtgtcggcgaaaacccactgcgtggtggcggggccgggtgcgggttccaagctggccaag
gccagcgagctgggcctgaaggtattggacgaagaggctttcgtcgccttcctcgccaag
cacaacatcaccgtctga

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