Pseudomonas sp. NS1(2017): CI807_31115
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Entry
CI807_31115 CDS
T11105
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns01501
beta-Lactam resistance
psns01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CI807_31115
01503 Cationic antimicrobial peptide (CAMP) resistance
CI807_31115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psns03036
]
CI807_31115
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psns02000
]
CI807_31115
01504 Antimicrobial resistance genes [BR:
psns01504
]
CI807_31115
Chromosome and associated proteins [BR:
psns03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CI807_31115
Transporters [BR:
psns02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CI807_31115
Antimicrobial resistance genes [BR:
psns01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CI807_31115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_RND
HH_MFP_RND
YknX_C
BSH_CzcB
RND-MFP_C
Biotin_lipoyl
BSH_YknX
BSH_LcnD
BSH_CusB
CzcB_C
HH_EMRA
Beta-barrel_YknX
Beta-barrel_AprE
CSD2
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
ASV40472
LinkDB
All DBs
Position
6680789..6681919
Genome browser
AA seq
376 aa
AA seq
DB search
MLRRRMLFMLGVVLLIVLLLGGYKAFSIYQQIQVFSQPKPAVSVAVATVVEQPWQQRLPA
VGSLKALQGVNLSLEVAGTVKDVQFESGQNVKAGQPLVQLDSAVESALLETAQADLGLAQ
LDYGRGSQLVGSQAISKGEFDRLSAQLQKNKATVNQLKASLAKKHIVAPFSGTIGIRQVD
VGDYLASGTVIATLQDLSSLYVDFYIPEHSVPRVALGQAVQVEVSAYPGEQFPGSISAIN
PKVENSTRNVLVRATLANPDGKLLPGMFTSLNVLLPNPAPQIVVPESAITYTLYGNSVYA
VAEKKTDAGEVEKDADGKSLLIAERRFVETGERRGGLVLVSKGLKAGEQVVSAGQLKLDN
GTPIAISPDKNLPAGH
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgtcgcatgctgttcatgttgggtgtcgtcctgttaatcgtcctgctgctg
gggggctataaagccttttccatctatcagcagatccaggtcttttcccagccaaaaccg
gcggtcagcgtggcggtcgcgacggtggtcgaacaaccctggcaacagcgccttccagcc
gtcggctcactcaaagccctgcaaggtgtgaacctgagcctggaggtggccggtacggtc
aaggacgtgcagttcgagtccgggcagaacgtcaaggctggccaacccctggtgcaactc
gacagcgcagtggaaagcgcgctgctggaaaccgcccaggcggacctcggcctggcgcag
ttggactacggtcgcggcagccaactggtgggcagccaggcgatctccaaaggcgagttc
gaccgcctgtccgcgcaactgcaaaagaacaaggccacggtcaatcagctcaaggcttca
ctggcgaagaagcacattgtcgcgccgttcagcggcaccatcggcattcgccaagtcgac
gtgggcgactacctggccagcggcacggtgatcgccaccttgcaggacctcagcagcctc
tatgtcgacttctatatccccgaacactccgtgcccagagtcgccctcgggcaggcagtg
caggtggaagtctcggcttatcccggcgagcaatttccgggcagcatcagcgcgatcaac
ccgaaagtcgaaaacagcacgcgcaatgtgttggtgcgcgccaccttggccaatccggat
ggcaagctgctgccgggcatgttcaccagcctgaacgtgctgctgcccaacccggccccg
cagattgtggtgccggaaagcgcaatcacctacaccctctacggtaactcggtgtacgcc
gtggccgagaaaaaaaccgacgccggcgaggtggaaaaggatgctgatggcaagtcgctg
ctgatcgccgagcgacgtttcgtcgagaccggcgagcgacgcggtggcctggtgctggtg
agcaagggcctcaaagccggtgagcaagtggtgagcgccggccagctcaagctggacaac
ggcacgcccatcgccatcagcccggacaaaaacctgccggcagggcactag
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