Pseudomonas sp. NyZ201: ACPFMA_05305
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Entry
ACPFMA_05305 CDS
T11215
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny00300
Lysine biosynthesis
psny00550
Peptidoglycan biosynthesis
psny01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACPFMA_05305
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACPFMA_05305
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psny01011
]
ACPFMA_05305
Enzymes [BR:
psny01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ACPFMA_05305
Peptidoglycan biosynthesis and degradation proteins [BR:
psny01011
]
Precursor biosynthesis
Amino acid ligase
ACPFMA_05305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
XRQ39883
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Position
1140192..1141655
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AA seq
487 aa
AA seq
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MTMPLSKLFANASSDPLIRELTLDSRNVRPGDLFLAVPGAKVDGRDHIVDALKRGAAAVA
YEVQGAKVLPITDAPLIPVKGLVAQLSDIAGRFYGEPSRLLELVGVTGTNGKTSVTQLVA
QALDLLGQRCGLIGTLGTGFYGALQSGRLTTPDPLAVQSTLNDLKKAGARAVAMEVSSHA
LEQGRVAALAFDIVVMTNLSRDHLDYHGSMEAYKAAKAKLFAWSNLRCRVVNLDDDFGRE
LAAEARESRLISYSLKDPAATLYCREASFDDDGVRAVLVTPQGEHMLRSRLLGRFNLSNM
LAAVGTLLAMDHPLDEILKVTAKLEGPVGRMQRLGGGSRPLVVVDYAHTPDALEKVLEAL
RPHARGQLTCLFGCGGDRDRGKRPLMAELAERLADQVVVTDDNPRSEDPQAIFDDIRPGF
SKADAAQFIPGRGEAIARVIAAAGVDDVIVLAGKGHEDYQEINGERHDFSDLVEAEKALA
VWEASHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccattgagtaaattgttcgccaacgccagcagcgatccgctgattcgcgaa
ctgaccctggacagccgcaatgtccgccccggcgacctgttcctggctgtgccgggtgcc
aaggtcgatggtcgcgaccatattgtcgatgcgctcaagcgcggcgcggcggcagttgcc
tatgaagtgcagggtgccaaggtattgccgatcaccgatgcgccgttgattccggtcaag
ggcctggtcgcgcagttgtcggatatcgccggacgcttctatggcgagcctagccgtctg
ctcgaactggtaggtgttaccggcaccaacggcaagaccagcgtgacccaactggtcgcc
caggccctcgacctgctgggccagcgttgcggcctgatcggcaccctcggtaccggcttc
tacggtgcgctgcaaagcggccgcctgaccacgcccgatccgctcgccgtgcaatcgacc
ctcaatgacctgaagaaggccggcgcgcgggccgtggccatggaagtgtcgtcccatgca
ttggagcaagggcgggtcgccgcactggcgttcgatatcgtggtgatgaccaacctgtcc
cgcgaccatctcgactatcacggcagcatggaagcctacaaggcagccaaggcgaagctc
ttcgcctggtcgaacctgcgttgccgggtggtcaatctggatgacgatttcggtcgcgaa
ctggccgccgaagcgcgcgagtcgcggctgatcagctatagcctgaaagacccggcagcc
accctttattgccgcgaagccagcttcgacgatgatggcgtgcgcgccgtgttggtaacg
ccgcaaggcgagcacatgctgcgcagccgtctgctcggtcggttcaacctgagcaatatg
ctggcggcggtcggcaccctattggcgatggatcatccgctggatgaaattctgaaggtc
accgcgaagctcgaaggccctgtcggccgcatgcagcgcctcggcggtggcagcaggccg
ttggtggtggtcgattacgcccacaccccggatgccctggaaaaggtcctcgaagccctg
cgcccgcatgcccgtggccagttgacctgcctgttcggctgcggcggtgaccgtgatcgc
ggcaagcgcccactgatggcggaactggccgaacgcctggccgatcaggtggtggtcacc
gacgacaacccgcgtagtgaagatcctcaggccatcttcgacgatattcgtcctggcttc
tccaaggcggatgccgcgcagttcatccccggccgtggtgaggcgatcgctcgtgtgatc
gccgctgccggcgtcgacgacgtcatcgtcctcgctggcaaaggccacgaggactaccag
gaaatcaacggcgaacgtcacgatttttccgatcttgttgaagccgaaaaggcgcttgca
gtctgggaggcctctcatgcttga
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