Pseudomonas solani: PSm6_28970
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Entry
PSm6_28970 CDS
T09213
Symbol
mexF_1
Name
(GenBank) resistance-nodulation-cell division (RND) multidrug efflux transporter MexF
KO
K18299
multidrug efflux pump
Organism
psoa
Pseudomonas solani
Module
psoa_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psoa02000
]
PSm6_28970 (mexF_1)
01504 Antimicrobial resistance genes [BR:
psoa01504
]
PSm6_28970 (mexF_1)
Transporters [BR:
psoa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PSm6_28970 (mexF_1)
Antimicrobial resistance genes [BR:
psoa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
PSm6_28970 (mexF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BCD86490
LinkDB
All DBs
Position
3177233..3180427
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AA seq
1064 aa
AA seq
DB search
MAFSRFFIGRPIFAAVLSILMLIAGALSLFQLPVSEYPEVVPPTVVVRAQFPGASPETLG
ATVASPLEQALSGVRGMLYMSSQSTADGVMTLTLTFALGTDLDSALVQVQSRVSRASSQL
PVDVQRLGITVDKTSPALAQVIHLYSPSGQYDPIYLSNYMTIHIIDELFKIEGVSDIRLL
GMGDYSLRVWLDPDKVASYGLGSMDVVQAIRDQNREVAIGALGAPPAADGSAFQLQIRSQ
GRLVAEDEFERIVIRSAGSGNVVHLRDVARIELGANQYSLSAHLDGQPSAALQVFQEADA
NSIELSDKLRNRMAELAEAFPQGIKHSIGYDPTVFVRGSIKAVVLTLLEALVLVVLVVVL
FLQNWRASIIPLAAVPVSLIGTFAVMQLLGFSINALSLFGLVLAIGIVVDDAIVVVENVE
RNIALGLEPKAATQRAMEEVIGPIIATSLVLCAVFIPTAFISGLTGQFYKQFALTIAIST
VISAINSLTLSPALAAMLLKPPSEGRDPLSRGIYRAFGGWLFRPFNRFFQHASDAYVSGM
ARVLRGGSLALLLYVVLVGLGYLGFERIPMGFIPQQDKQYLVAFAQLPEGASLERTERVI
LKMSELALEQPGVANTVSFSGLSINGFVNSSSAGLMFIPLKSFAERGGDLSDVSIARSLN
ARYGDIEDAFVLVVPPPPVESLGTIGGFKVQIEDRAGLGHEALYRQTQRLLDKARQLPEL
EGMFSSYQISAPQIDVVVDRDKARTHGVAISEVFDTLQIYMGSVYANDFNRFGRTYQVHV
QAEQGFRGEPGQIGLLKVRNEQGVLVPLASFVDVRLAAGPDRVMHYNGFLSAEITGGPAA
GYSTGQAQAAFEALLKTELEQGMAYEWTELTYQQILAGTSTNLVYPLCVLLVFLVLAALY
ESWSLPLAVILIVPMTLFSALAGVVVSGGDNNIFTQIGLIVLVGLACKNAILLIEFARAR
QACGVNRLEAVLEACRMRLRPILMTSFAFVMGVAPLVLATGAGAEMRRAMGITVFSGMLG
VTFFGLLFTPLFYVLLRRTVEGRNPRPKIAQPAPGGTFDKGVAE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctctcgctttttcattggtcggcccatcttcgccgctgtcttgtcgatcctc
atgctgatcgccggagccctttcgcttttccagttgccggtcagcgagtacccggaggtt
gttcctcccactgtcgtggtgcgcgcacagtttccaggtgccagtcctgaaactctggga
gcaacggtggcgtcacccttggagcaggcactgtccggtgtcaggggcatgctgtatatg
agctctcagtcgacagcagacggggtcatgaccttgacgctgaccttcgccctaggtacg
gatctcgatagcgcgctggttcaggttcaaagtcgagtcagccgtgcctcgtcccagttg
cccgtcgatgtccaacgcctcgggattacggtcgacaagacctcgcctgcgttggctcag
gtgattcatctctattccccgtccggacagtacgatccgatctacctctccaactacatg
acgatccacatcattgatgagcttttcaagatcgagggtgtaagcgacatacgcctgttg
ggcatgggcgattattcgctacgggtctggttggacccggacaaggtcgcgtcctacgga
ctcggttcgatggatgtcgttcaggcgatacgtgaccagaaccgggaagttgccatcggt
gcgcttggtgctcctcctgcggcggatggctcggcattccaactgcagatacgttcgcag
ggtcgtctggtggcagaggatgagtttgagcgcatcgtcatccgttccgccggctctggg
aatgtggttcacctcagggatgtcgctcgcattgaactcggggcgaaccagtattcactg
agtgcgcatctggatggccagccatcggcagctttacaagtcttccaggaggccgacgcc
aactcgatcgaactctcggacaagctccgtaaccgcatggccgaactggccgaagcgttc
cctcagggcatcaagcattccattgggtacgatccgaccgttttcgttcgaggctcgata
aaggctgtagtcctgaccctgctggaagcactggtactggtggtgctggtggtggtgctc
ttcctgcagaattggcgtgcgtccatcatcccgctggctgccgtgcccgtttcgctgatc
ggcaccttcgccgtgatgcaattgcttggtttctcgataaacgcgctttcactgttcggc
ctggtgctggcgattggcatcgtcgtcgacgatgcgatcgttgtcgtggaaaacgttgag
cgtaacatcgcactgggcctggagccgaaggcagccactcaacgggcgatggaggaggtc
attggccccatcattgcgacctccctggtgctgtgcgcggtcttcattccgacggctttc
atttccggactcacggggcagttctacaagcagttcgccttgactatcgctatctcgacg
gtcatctccgcgatcaattccctgacgttgtctcccgcattggccgcgatgttgctcaag
ccgccttccgaggggcgcgatccgctgagccgggggatttatcgtgcctttggcggatgg
ctcttccgccccttcaaccgttttttccagcatgcaagtgatgcttacgtgagcggtatg
gcacgggttcttcgaggaggaagcctcgcactgctcctgtacgtcgtgcttgtcggcctt
ggctatctggggttcgagcggattccaatggggttcattccccagcaggacaagcagtat
ctggtcgctttcgcgcaacttccggagggggcgagcctggagcgcacggagcgggtgatc
ctgaaaatgtccgaacttgccctggaacaacccggtgtggccaatacggtgagcttcagc
ggcctatcgataaacggcttcgtcaacagctctagcgcagggttgatgttcatcccgctg
aaatccttcgctgagcgtggcggcgacctctccgatgtctccatcgcccgatccctcaat
gcgcgctacggggacatcgaggatgcgttcgtccttgtggtgcctccccctccagtggag
agcctggggaccataggcgggttcaaggtccagatcgaggatcgggctggcctcggacat
gaggcgctttatcggcagacccagaggcttctggataaggcccgacagctaccggaactg
gagggcatgttctccagctaccagatcagcgcaccgcagatagacgtcgtagttgatcgg
gacaaggcacggacccacggtgtcgcgataagcgaggtcttcgacacgttgcagatctac
atgggatcggtctacgccaacgacttcaaccgatttggtcgcacctatcaggtgcatgtg
caagcggagcaaggcttcaggggagagccagggcagatcggcctcctcaaggttcgcaat
gagcagggggtgctggtcccgcttgcctctttcgtcgatgttcggctcgcagcaggaccc
gaccgggtgatgcattacaacggtttcctttcggccgagatcacagggggccccgccgcg
ggttacagcaccggccaggcgcaggctgctttcgaggcgttgctgaagacagagctggag
cagggcatggcgtacgagtggactgagctgacctaccagcagattctcgccggcacctct
acgaacctggtctacccactgtgcgttctactggtctttctcgtgctggcggccctgtat
gagagctggagcctgccgttggctgtcattctgatcgtgccgatgacgctgttctcggca
ttggcgggcgttgtggtcagtggtggggacaacaacatcttcacgcagatcggtcttatc
gtactggtggggctggcctgcaagaacgcgatcctcctcatcgagttcgcccgggccagg
caggcgtgtggcgtgaaccggctagaagcggtcctggaggcctgtcgcatgcgccttcgt
ccaatcctgatgacgtcgttcgccttcgtcatgggggttgctccccttgtcctggccacc
ggcgctggagctgaaatgcgcagggcaatgggtatcacggtcttttccgggatgcttggg
gtcacttttttcggcctcctgttcaccccccttttctacgtcctgcttcgccgtaccgtg
gaggggagaaacccacgcccgaaaatcgcacaacccgcccctggcggtactttcgacaaa
ggagttgccgaatga
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