Pseudomonas solani: PSm6_53880
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Entry
PSm6_53880 CDS
T09213
Symbol
metC
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
psoa
Pseudomonas solani
Pathway
psoa00270
Cysteine and methionine metabolism
psoa00450
Selenocompound metabolism
psoa01100
Metabolic pathways
psoa01110
Biosynthesis of secondary metabolites
psoa01230
Biosynthesis of amino acids
Module
psoa_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PSm6_53880 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PSm6_53880 (metC)
Enzymes [BR:
psoa01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
PSm6_53880 (metC)
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Motif
Pfam:
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BCD88981
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Position
complement(5916734..5917915)
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AA seq
393 aa
AA seq
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MNKDDIPAFSISTQLTMLGRDPAEQFGFVNAPLYKGSTIIYKTLDDIEARRSRFSYGTAG
SPTIAHLEDAWTQLTGAKGTVLSTSGLGAVALALFSTTKAGDHILIPDSVYRPTRNFCNQ
MLARYGVTTTYYDPMIGADIERLIGPNTTTLFLEAPGSQSFEVQDIPALVEVARRHGVKT
ILDNTWATPIFFRGHDHGIDLTVEAGTKYLGGHSDILLGLVTANEACWPALRATYDAMSM
LPGAEDCVQALRGMRTLFLRLKEAERRGLEMARWLSERPEVSRVLHPAFESCPGHAHWKR
DFKGSSGLFSIVLAPGYTRDGLAAMLDNLSIFSMGFSWGGYESLVIPFDCSTYRTATRWE
AEGFALRLQIGLEDMDDLKGDLARGFARLAAAG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagacgatatcccggcattcagtatcagcacccagctcaccatgctcggccgc
gacccggcggagcagttcggcttcgtcaacgcgccgctctacaagggctcgaccatcatc
tacaagacgctggatgacatcgaagcccggcgcagtcgcttctcctacggcacggccggt
tcgccgaccatcgcccacctggaggacgcctggacccagctcaccggcgccaagggcacc
gtgctgtccacctcgggcctgggggccgtggcgctggcgctgttcagcaccaccaaggcg
ggcgaccacatcctgatccccgacagcgtctaccggcccacgcgcaatttctgcaaccag
atgctggcccgctacggcgtgaccaccacctactacgacccgatgatcggcgccgatatc
gaacgcctgatcggcccgaacaccaccaccctgttcctggaagcgcccggctcgcagagc
ttcgaggtgcaggacatcccggccctggtggaggtggcgcgccgccacggggtgaagacc
atcctcgacaacacctgggcgacgccgatcttcttccgtggccacgaccacggcatcgac
ctgacggtggaggcgggcaccaagtacctgggcgggcattcggacatcctgctggggctg
gtcaccgccaacgaggcctgctggccagccctgcgcgccacctacgacgccatgtcgatg
ctgcccggcgcggaagactgcgtgcaggcgctgcgcggcatgcgcacgctgttcctgcgg
ctcaaggaagcggagcggcgtggcctggagatggcccgctggctgagcgagcgcccggag
gtgtcccgcgtgttgcacccggccttcgagagctgccccggccatgcccactggaagcgc
gacttcaagggctcgtccgggctgttctccatcgtcctggcgccgggctacacccgcgat
ggcctggcggcgatgctcgacaacctgtcgatcttcagcatgggcttctcctggggcggc
tacgaaagcctggtgatccccttcgattgcagcacctaccgcaccgccacccgttgggag
gccgaaggcttcgccttgcgcctgcagatcggcctggaagacatggacgacctcaagggc
gacctggcccgtggtttcgcccgcctggccgcagctggctga
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