Phytophthora sojae: PHYSODRAFT_503308
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Entry
PHYSODRAFT_503308 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
psoj
Phytophthora sojae
Pathway
psoj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHYSODRAFT_503308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_503308
Spliceosome [BR:
psoj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PHYSODRAFT_503308
Complex C
U5 SnRNP specific factors
PHYSODRAFT_503308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
DUF5625
Ras
Motif
Other DBs
NCBI-GeneID:
20658210
NCBI-ProteinID:
XP_009526718
JGI:
Physo3_503308
UniProt:
G4ZI17
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MEESLYDEFGNYIGPELRSSEDDNDGDVDDAGRHVDTLTLQDAHMEDGESAIVLHEDKQY
YPEASEVFGDAETLVMEEDAQTIETPIIEPVKTKSFSVLEQKVPQTTYSTQFLASLMDHP
QLVRHVAIVGDLHHGKTLFTDLLVQQTHVDRWDPATEKRYTDTRKDEQERKLSIKSAPVS
LVLPTARGKHYLLNVLDCPGHVNFSDETTAALQVADGAVLVVDAIEGVMMNTERLVKAAL
RANVAIVLVVNKVDRLIIELKLPPADAYFKLLHTIEEVNAIIDANTPANQEKQRLSPEVG
NVCFASGQHGWSFTLESFAQIYADTYPGVPPSALAARFWGDKYFNPQTRTFTKKSPYPGA
LRSFIQFVLEPLYKMYSKVLNGDPKELSASLRALGLRLRKEELNLNPRPLLKLVLGKFFG
NVTTGFMDMVVNHVPSPLVTAKTKLENIYTGNQSSELSIVRGIQNCDPKAPLMVNIVKLY
SSPDGTTFSAFGRVYSGEVRDNQDVKVLGEAYSAEDDEDMCTRSIESVCIAQGRYKIQVN
RIPAGNWVMLEGVDASITKSATITDADEDLLQDEEVGIFRPINIAFGTTSVMKLAVEPLN
PAELPKMLEGLRKISKSYPLVRTKVEESGEHVILCTGELAADCILHDLRRMYSEIEIKVA
DPVVAFSETVAETSSVQCFAETPNQKNKIIMISEPLDASLAQDIEAGAIKLDMSKKDVAS
FFQTNYKWDALAARSVWAFGPESNGPNVLLDDTLSTEVNKSSLNMIKDSIVQGFQWSCRE
GPLCDEPIRNTKFKILDATIASEPIHRGGGQVIPTSRRVAYSAFLTATPRMLEPMYALEI
QCPADTVSSLYQVLSRRRGHITHDAPKAGSPLYTVRGFVPVIESFGLETDLRVFTQGQAF
ITQVFDHWAVVPGDPLDTSVVLRPLEPAPVNDLAREFMVKTRRRKGLSEDVNVSKYFDEP
MLRELARHEIELQNLI
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtctctgtacgacgagttcggcaactacatcggcccggagctgcgcagcagc
gaggacgacaatgacggcgacgtggacgacgccggacggcacgtggacactttgacgctg
caggacgcgcacatggaggacggcgagtccgccatcgtcctccacgaggacaagcagtac
tacccggaggccagcgaggtcttcggggacgccgagacgctcgtgatggaggaggacgcg
cagaccatcgagacgcccatcatcgagcccgtcaagaccaaatccttctcggtgctggag
cagaaagtgccccaaacgacctactcgacccagttcctcgccagcctcatggaccacccg
cagctcgtgcgccacgtcgcaatcgttggagacctccaccacggcaagacgctgttcacg
gacctgctggtgcagcagacgcacgtggacaggtgggaccccgccacggagaagcgctac
acggacacgaggaaggacgagcaggagcgcaagctcagcatcaagagcgcgcccgtgtcg
ctcgtgctgcccacggccaggggcaagcactacctgctcaatgtgctggactgtccgggt
cacgtcaacttctcggatgagacgacggcggcgctgcaggtcgcggacggagcggtgctg
gtcgtggacgccattgaaggcgtcatgatgaacacggagaggttggtgaaggcggcgttg
cgcgcgaatgtggcgattgtgttggtggtgaacaaggtggatcggctgattattgagctc
aagctgccgccggccgacgcgtacttcaagctgctgcacacgatcgaggaggtgaacgcc
atcatcgacgccaacacgccggcgaaccaggagaagcagcggttgtcgccggaagtgggc
aatgtgtgctttgcgtccggtcagcatggatggagctttaccctggagtcgttcgcgcag
atctacgcagatacgtacccgggtgttccgccgtcggctttggctgcgcgcttctggggc
gacaagtatttcaacccgcagacgcgcacgttcaccaaaaaatcgccgtaccctggtgct
ctgcggtcgttcatccagttcgtccttgagccgctctacaaaatgtactcgaaggtgctg
aacggtgatccgaaggagctgtcggcgtcgctgcgtgccttgggtctgcgcttgaggaag
gaggaactgaacctgaatccgcgcccgctgctgaagctggtgctgggcaagttcttcggc
aacgtcacgactggattcatggacatggtggtgaaccacgtcccgtcgccgcttgtgacg
gcgaagaccaagctggagaatatttacacaggcaaccaatcgtccgaattgagcatcgtt
cgcggcatccagaactgcgaccccaaggcgccgttgatggtcaacattgtgaagctgtac
tcgtcgcctgacggcaccacgttcagtgcgttcggccgtgtgtactcgggtgaagtccgt
gataaccaggatgtgaaggtgctgggagaagcctacagcgctgaagacgacgaggacatg
tgcacgcggagtatcgagagcgtctgcattgcgcagggacgctacaaaatccaggtcaac
cgcatcccggcaggtaactgggtgatgctcgagggcgtcgacgcgtcgattacgaagagc
gccacgatcacagacgccgacgaggaccttctgcaggacgaggaggtcggcatcttccga
cccattaacatcgcatttggcaccacgtccgtgatgaagctggctgtcgagccgctgaac
ccggcggagctgcccaagatgctcgagggtctgcgtaaaatcagcaaaagttacccgctt
gtgcggacgaaggtggaggagagcggtgaacacgtgatcctctgcaccggcgagctggct
gccgactgcatccttcacgacctgcggagaatgtactcggaaattgaaatcaaggtggca
gaccccgtcgtcgccttctccgagactgtggctgagacgtcttctgtacagtgctttgcg
gagacgcccaaccagaagaacaagatcatcatgatttccgagccgctggacgcgagtctc
gcacaagatatcgaagcgggtgctatcaaactggacatgagcaagaaggacgtggccagc
ttcttccagaccaactacaagtgggatgcgcttgcagctcgctccgtatgggcgtttgga
cctgaaagcaacgggcccaacgtgctgcttgacgacactctgtccactgaggtgaacaag
tcgtccctcaacatgatcaaggatagcatcgtgcagggtttccagtggagctgtcgcgag
ggccctctgtgtgacgagccgatccgcaacaccaagttcaagatcctggacgctacgatc
gcctcggagccgatccaccgcggcggtggccaggtgatcccgacctcccgccgtgtggcc
tactccgcgttcctgaccgccaccccgcgcatgctcgagcccatgtacgcgctcgagatc
cagtgccccgccgacacggtgtcctcactgtaccaggtgctgagtcgccgccgtggccac
atcacacacgacgctcccaaggctggttcgccgctgtacacggtgcgcggcttcgtgccg
gtgatcgagtcgttcggcctggagacggacctgcgcgtgttcacacagggccaagccttc
atcacacaagtgttcgaccactgggccgtggtccctggcgacccgctggacacgagcgtc
gtgctgcgtccgctggagcccgcgcccgtgaacgacctggcgcgcgagttcatggtcaag
acgcggcgccgcaagggcctgagcgaggacgtgaacgtgagcaagtactttgacgagccc
atgctgcgcgagctggcgcggcacgagatcgagctgcagaacctcatctag
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