KEGG   Papaver somniferum (opium poppy): 113276228
Entry
113276228         CDS       T05758                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1-like isoform X1
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113276228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psom03021]
    113276228
Enzymes [BR:psom01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     113276228
Transcription machinery [BR:psom03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     113276228
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 RNA_pol_Rpb1_7
Other DBs
NCBI-GeneID: 113276228
NCBI-ProteinID: XP_026381590
LinkDB
Position
4:complement(104386848..104398649)
AA seq 1492 aa
MDKDVILEQPTGVLTGIKFSLLTEEDLEKHSAVSVESVNDVTDPKMGVPNMSSECTTCGA
KDIKTCEGHNGIIKLPIDLFHPFFTSEIVEILNQVCPGCKSVRTKGPSSMTETSASPYYA
QQFTCKYCVKSSTDWYPKMKFKAAGARDYFGKNISEIIVEVTEKIPRKYFNKGLELPMDY
WDFIMKDPQQVEADYKSHRRSLTPLQVCNILKDVDPNFVKSVVPKRILLFLSAIPVTPNC
GRVVEMANLLTTGQSMIFDDRTKAYKRLVDFKRSANELGSRVADCLSVSKLNSGKSSSNK
LDSFNNKFDFSKKKPDSSKTGHQWVKDVMLGKMTDNSFRMVIVGDPRVKLGEIGIPNDIA
ERLEVTECLNSWNWQKLNMCANSRLLEKGVLIVRRKGKKACVFKTDDLKIGDAVYRPLEE
GDLVMINRPPSLHQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDS
RVELRELVTLNQQLVNGQNGQSLLSLSHDSLAAAYLLRKDDVYLKKAQIQQLEMFSLHLS
PFPAIVKAPTPEVREDKACLHQGPIEQLEMLASHHFRSPAIVKAPNFQISMWTGKQLLSM
LMPQDFNFDFPVNGVCISEGEILSSSLESAWLQDTDDSIYSTLVRNYGDKTLDILFSAQE
ILLEWISMRGFSVSLSDIYLSSNSCSRGNMVEEVSMGLLEATQAFRTKDFLINRTCMENL
LRDSEDTHNCETFEVDDDNRLYDLTEINIGAYQDVFRDVQRLVYHYASKENSMLAMVRSG
SKGSLLKLVHQSLCLGLQHSSAPLSFRVPSMLSCSTRNHRDVDTPGSHILYAVIENSFLS
GLDPLECYVHSVSNRDSSFGENAEIPGTLCRKIMFYMRDLYLAYDGTVRNAYGNQLVQFS
YGVSDKVTSTEDEKSCQISTGSDRRCGGEPVGSLAACSISEAAYSALDKPLSSVEDSLLL
KLKKLLMSSKTKTAEVQNVTLFLSKKLKRLNYGSEYGAIEVKSHLEKVLFSEVISDTAIV
FSEENCQTHLSPWICHFHISKEEMQKKGLNVASISSALEKNCCSNLSKQKFELPVMHLDS
RSHCSMAGPETSCIVGTVDIEEGCSNPLAGVRDVMMPFLLGTVIKGFVEVEKVDIVWNDL
PRGSRTSSSGELCLRVSMARKFKNLKFWSIIKNACLPIMDLIDWERSYPNSINDVSHAYG
IEAAWAHFFRSLKSVTSDIGKSILEEHLLLIADRLSFTGEFLGLTAKGLITQTSTPSPFN
QACFSRPLFNFVQAAKDEAKDDLSGTLDAVAWGKKVPIGTGGNFEIIYSQKDYQVDKLDI
FNTLSTQPSYKDARKASPTKGDKWGKYSFADGFAIPATPVKSESIPKEVGNASPSENDIL
DMVFTLQNILYKYPVGHSLNEDEKKTMIYALRYHPRANEKVGSGLREIKVGYHPKYNSRC
FNVVRTDGTVEDFSYRKCVFEAAKQTSIHCAESIMKRFKNDNNNTYLVQEHN
NT seq 4479 nt   +upstreamnt  +downstreamnt
atggataaggacgtgattctagagcagcctactggtgtcttgacgggcataaagtttagt
cttttgactgaagaagacttggaaaagcactccgctgtctcagtagaatccgtgaatgat
gttacagatcctaagatgggggtaccaaatatgtcatccgagtgtacaacatgcggggcc
aaagacataaaaacctgtgaaggacataatggaattattaaattgccaatagatcttttt
catcccttcttcacttcagaaattgtggaaattctgaatcaagtctgtccgggttgcaag
tccgtcaggacgaagggcccgagctcaatgacagaaacttcagcttcgccatattatgct
caacaatttacgtgcaaatattgtgttaaaagctcaactgattggtatcctaaaatgaag
tttaaagctgcgggtgcaagagattattttggaaagaatatttcagaaattattgtagaa
gtgacagaaaagattcctaggaagtacttcaataagggtcttgaactgccaatggattac
tgggattttattatgaaagacccacaacaagtagaagctgattataaatcccacagaaga
tctctgacaccattacaggtttgtaatatattgaaggatgttgatccgaacttcgtcaaa
agcgtagttccaaagcgaatattgctttttctttctgcaataccagttacacccaattgt
ggccgcgtggtggagatggcaaatctactcactactgggcagagtatgatttttgatgat
cgtaccaaagcttacaaaaggcttgttgattttaaaagaagtgctaatgaacttggctcc
cgcgtggccgactgcttaagtgtttccaagctaaacagtggaaagtcgtccagcaataaa
ctagattctttcaacaataaatttgatttttcaaagaagaaacccgattcttccaaaact
ggtcatcaatgggttaaagatgttatgcttggcaagatgacggataattctttccgtatg
gttattgttggtgacccgagggtcaaattgggtgaaattggtataccaaatgatattgca
gaaaggttggaggttactgagtgcctaaactcgtggaattggcaaaagttaaatatgtgt
gccaattcccgtcttctggaaaagggagtccttattgtaaggagaaagggtaaaaaggct
tgcgtgttcaagacggacgatctgaaaattggtgacgctgtctataggcctttagaagaa
ggcgatcttgtgatgattaatcgacctccatctttgcatcaacactctataattgctttg
tctgttaagatccttccaacaggctcagttgcttccttaaaccctcttatatgtgatcct
ctccgtggagattttgatggtgattgtcttcaatgttatgttccacaatccattgactcc
agggtggagttgagggagcttgttactttgaaccagcaactagtaaatggacaaaatgga
cagagcctactttcattgagtcatgatagcttagctgctgcttatttgctaaggaaagat
gatgtttacttgaaaaaagcacaaattcagcagttagaaatgttttctcttcatctttcc
ccctttcctgccattgtgaaagcacccacaccagaagtgagggaggataaagcgtgcttg
catcagggacccatcgagcagttagagatgttggcttctcatcattttcgctctcctgct
attgttaaagcacccaattttcagatatctatgtggactggtaagcagctactgagcatg
ttgatgccccaagactttaattttgattttccagtgaatggtgtttgtatatctgaggga
gagatactatcttcttcactggagtctgcttggctgcaagatacggatgatagcatttac
tctactctggtcaggaattatggggataaaactcttgacatcctgttttctgctcaggag
attttgttggaatggatatcaatgaggggttttagtgtttctttgtcagatatataccta
tcttctaattcatgctccagaggaaatatggttgaggaagtgagcatgggtttactagaa
gctacccaagcatttcgaaccaaggactttttgataaatcgtacgtgtatggagaatctt
ctgagagatagtgaagacactcataattgtgaaacttttgaagtggatgatgacaacagg
ttatatgacttgaccgaaataaacattggtgcatatcaggatgtctttcgtgatgtccaa
aggctggtgtaccattatgcatcgaaggaaaactcgatgcttgctatggttcgatctgga
agcaagggtagtttactgaaattagttcaccaaagcctgtgtcttggtttacaacattcg
agtgctccattatcattcagagtgcccagcatgctttcatgttctacaaggaatcataga
gatgttgatactcctggatcccacattctttacgccgtgattgaaaattctttcctgagt
gggttggaccctttagaatgttatgtgcattcagtgtcaaaccgggatagttcttttgga
gaaaatgctgagattccaggaactttgtgtcgaaagattatgttctacatgcgtgattta
taccttgcgtatgatgggacggtcaggaatgcatatggaaaccagcttgtccaattctct
tatggtgtatctgataaggttacatccactgaggatgagaaatcttgccagattagtact
ggcagtgacagaagatgtggcggcgaacctgtgggctcattggctgcatgctccatttct
gaagcagcatatagcgccttagataagccactttctagtgtggaagattctttattgctg
aagctaaagaaattattgatgtcttcaaagacgaagacagcggaggtccagaatgtaaca
ctgtttctgtctaagaaactaaaaagattgaattatggatctgagtatggagccatagaa
gttaagagtcatctggagaaagttcttttttcagaagttatttctgacactgcaattgtt
ttttctgaagaaaattgtcagacccatcttagtccatggatctgccactttcacattagc
aaggaagagatgcagaagaaagggctgaatgttgcatctatatcgagtgctcttgaaaag
aattgttgctctaacttgagcaaacagaagtttgaacttccagtcatgcatcttgatagc
agaagtcattgctcgatggctggtcctgaaaccagttgtattgtggggactgttgacatc
gaagagggttgttccaacccattggctggtgttcgtgacgtgatgatgccatttttgctt
gggacagtcatcaaagggttcgtggaggttgagaaagtagatatcgtgtggaatgatttg
cccaggggatctcgtacaagttcttctggtgaactgtgtctaagagtttccatggccaga
aaattcaagaacctcaagttctggagtattattaagaatgcctgtctccccattatggat
ctaattgattgggaacgcagttacccgaacagcatcaatgatgtatctcatgcctatggg
atagaggctgcatgggcgcactttttcagaagtttgaagtctgtaacatctgatatagga
aagagtattcttgaagaacatctgctcctaattgcagatcgtttgtcttttacaggggag
tttctcggtttaactgccaaaggattaataactcagacatccactccatctccatttaat
caagcatgcttcagtagacctctcttcaatttcgtccaagctgcaaaggatgaagctaaa
gatgatctttcagggaccctagacgcagttgcatggggaaagaaagttcccattggcact
ggtggcaactttgagattatttattcgcaaaaggattaccaagttgacaaactggatatc
tttaatacgttatctacccaaccgagttataaagacgcacgaaaggcgtcccctacaaag
ggtgacaaatggggtaaatattcatttgcagatggatttgcaatcccagctacgcccgtt
aagtcagaaagcatcccaaaggaagttggtaacgcttctccttcagaaaatgacatatta
gacatggtctttacattgcagaacatcttgtacaagtatccggttggtcattctttgaac
gaagacgagaaaaagacaatgatttatgctttgcgttatcacccccgagcaaatgagaag
gtgggatctggacttcgtgaaattaaggttgggtaccatcccaagtataattctcgttgt
ttcaatgttgtaagaaccgacggtactgttgaagatttctcataccgaaagtgtgttttt
gaagctgcaaaacaaacttctattcattgtgctgaatcaataatgaaacggtttaagaac
gataacaacaacacttacctggtgcaagagcacaattga

DBGET integrated database retrieval system