Papaver somniferum (opium poppy): 113300020
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Entry
113300020 CDS
T05758
Name
(RefSeq) nuclear pore complex protein GP210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113300020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113300020
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113300020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_1st
Ig_NUP210_7th
Big_2
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_9th
Motif
Other DBs
NCBI-GeneID:
113300020
NCBI-ProteinID:
XP_026404936
LinkDB
All DBs
Position
7:complement(243710512..243722520)
Genome browser
AA seq
1949 aa
AA seq
DB search
MSPSGIILLVLLATLRASESVTGPHIADVNLLLPPRMTHPVEYRLQGTDGCFSWSWDHHD
ILSLEPEYNTSTTRCSTSVRVKSITPYSGRKETSIYATDLRTGINIRCKVFIDKLSRIQI
FHNSIKLDLDGLATLRVRAFDDQENVFSSLVGLQFSWGLRPEANETVHHLVHVPLKESPL
SDCGGFCGDLDTQITLEDSGVHSDLFAVKGTEIGHEIVSVNLIEPQFENMADKIVLTVAE
AMSIDPPSPVVVVIGASVHYHLKVIRQNTPKGIELPSANHRWSVVNASVARVDDMMGIAY
AINLGTTTINVEDTRVVGHVQMSSLHVVIPDNLCLYKLPVTSSGDPIEGMEAVPSTVRWY
VVVGRQYAIHMKVFSHRSGGQEIYITERDDVKLQYNDSVHWTSSVVPESIAVKHGWHNSR
ILKATSQGLGRLTANLTYHTGNTETTEVLQVVHEVMVCERVKFNMWKKDDSSTTIHLPWA
PGIYEEMELSATGGCVETTNGYKWYSSDASTVSVSASGVIQAKKPGQVTVKVASVHGSTN
YDEVAIKVSVPSSMVMLRSFAVESVVGTYLQAAVTMRAPYGSYFDRCDSFSSFIRWTVGS
QSFEIVNTTGKASAFKLSNIDGYQSLYSPPCAWTYVYASSVGRAILHATLFKELESFDHP
SDGPVVLKASTMISAHHPLVVQQAGNGNQFGGYWAELPTTETGFHLKDLNELYLVPGAEL
NVMLIGGPEQWDQGVEYVENVKNINGEQLSPKGGILVDRAFSNGGLYRISCLTMGIHQLV
FSRGNLIGDDHPLPTIEKVELSVTCSVPSSITLIANEPVNTPELISSAAQDDRTPDRIRA
TPITVANGCTIRVAAVGLHSSGKAFANSSSLGLNWEMSSCDGLALWDAITVERYRTTSSW
ERFLVLQNSSGLCIVRATVIGFSDTMSDHLRVRASLLLEEKSKNLLTDAIRLQLVSSLRV
VPESILLLFNPEAKATLLITGGTCSLHAVVNDTRVAEVIQPPNLECSQLMVNPRGLGTAL
VTVDDVGLAPHLTASARVRVADVDWIKIIAKEEIFLLVGSAQSFNILAGLHDGTVFDSSQ
YVYMSIHVHFEDPILELLSINASNSGESYIYGPGFAIQANSIGVTTIYVSARLRSGHEVC
SDPIRVEVYAPPRIHPNHIFLAPGASYMLTVKGGPSIGVYVGYTLDDETIADIQKTSGRI
RAISPGNSSIHANFFGKGSSFICQAYGSIEVGIPSSMMLSPQSEQLNVGREMPIFPSFTE
GNLFSFYELCKDYKWSIEDEQVLSYRSAEHSHKTLVSGALDTMYPSYSDRKDLGFINVVY
GRSSGKTNVAVSFSCDFTSESFSLSKMYIASASLWVVSYPPLSLGVPITWILPPFYTTSN
LLPESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGARIKTSDSGNLGCIQAKD
RSTGRAEIASCVRVAEVAQVRVTSKEFAFYVADLAVGAELDLLIHYHDALGNPFHEAYDA
VQMDADTNYPEVVSINSTRDSFGNIRLKAMRHGRALLRISMSNNQQKSDYLMVSVGAHLF
PQNPVLYVGRYINFSVGGSDNVVSGRWLSANDNVVSIDMLSGEALARGEGTTQVIFEGSN
LKLQTAVTVQKVDVVLVDSPEETLTNIPFPTKGYYFSIRFSDPSGQNFESFSSSKGVNYD
CRVDPPYIGYAKPWRDLDLGVTYCLFFPYSPEHLARSIPKSKTMRPDISLSITASMKELG
HVSGSSTALFIGGFSVLEMDKDLLRLNLTPVSNKSMITIVGNTDVDIYWQKRDLMSVTPV
IVYEYGMGGQADYEVKALRATRFKDKIIITLPATGQRVEVDVSFEPGETRLSSRSNFALW
ASIFGVVTLFTSLLIYKKFLNQAATSRPKSAAPPATPIRHTITPDRNRSVLQQSPRTPEV
FVEYVRDTIDKTPYYKRDAVRRRNPQNTF
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgtctccttctggaatcatcttgctagttctactagcaactttacgggcgtcggaatca
gttacgggtccacatatcgcagatgtaaacctattgttacctcctcgtatgactcatccc
gtcgagtatcgtcttcaaggaaccgatggttgtttctcatggtcatgggatcatcatgat
attttatcactagaacctgagtataatactagtacgactcgttgttcaacgagtgtacgt
gtgaaatccattactccatacagtggtagaaaagaaacgtctatttatgctactgattta
cggactggaattaatatccgttgtaaggtttttattgataaactttctaggattcagatt
tttcataactctattaagcttgatttggatggacttgcaacgttacgtgtacgtgctttt
gatgatcaagaaaatgtgttttcctcgctggtcgggttacagttttcttggggacttagg
cctgaagcaaatgaaacagttcatcatcttgttcacgttccactgaaggagtcaccgttg
agtgattgtggaggcttttgtggtgatcttgatactcaaataacacttgaagatagtggt
gttcactccgacttgtttgctgtgaagggaactgaaatagggcacgagattgtttctgtc
aatctaattgagccacaatttgaaaatatggcagataagatcgtgctaactgttgcagaa
gcaatgtcaatcgaccctccatcccctgtagttgtggttattggtgcttctgttcattac
catcttaaagttattcgtcagaatacacctaaaggaatagagttaccatctgccaatcat
cggtggtctgtggtgaatgcttcggtcgctcgagtcgacgacatgatgggcatagcatat
gcaataaatctgggaaccactactattaacgtggaagatactagagtagtgggacatgta
caaatgtcgtcacttcatgttgtcatacctgacaatttgtgtttgtacaaattacctgta
accagctccggtgatcccattgaaggaatggaagctgtgccttcaactgtccgctggtat
gttgttgtgggtcgacaatatgccattcacatgaaggttttctcacatagatctggtgga
caggaaatatacattacggagagggatgatgttaaattgcaatacaacgattctgttcac
tggacatcatctgtggttccagaaagcattgcagtgaagcacgggtggcataattctaga
atcctaaaagcaacttctcaaggactgggaagattgactgctaacttaacttatcatact
gggaacacagaaactactgaggttcttcaggttgtgcatgaagtcatggtctgcgagcgt
gtgaagttcaatatgtggaaaaaagatgattcttctacaactatacaccttccgtgggca
cctgggatatatgaagaaatggaactaagtgcaacaggaggctgcgtggaaacaacaaat
ggttacaagtggtattcatctgatgcttccactgtatctgtatctgcttccggggttatc
caggcaaagaagcctggccaagttactgtaaaagtggcatctgtgcatggttcgacaaat
tatgacgaggtggccattaaagtttccgttccttcatcaatggttatgctgcgaagcttt
gccgtggaatctgttgtaggaacatatcttcaagctgcagtaacaatgagagcaccctat
ggtagctatttcgatagatgtgattcgtttagctccttcataaggtggactgttggaagc
cagtctttcgaaatcgtcaatacaacaggaaaagcatcagccttcaagctatcaaatatt
gatggataccaatcactttatagtcctccatgtgcatggacatatgtatacgcttctagt
gtcggccgagctattctgcatgcgactttgtttaaagagttggaatcttttgatcatcca
tcagatggaccagttgttctgaaagcctctacaatgatttctgctcatcatccccttgtt
gtgcaacaggcagggaatgggaaccagtttggtggttattgggctgagttgcctacaaca
gaaactggatttcatttgaaagatttgaatgagttgtatcttgttccgggagcagagttg
aatgtgatgcttattggaggacctgaacagtgggaccaaggtgttgagtatgttgaaaat
gtcaaaaatatcaacggggaacaactatctcctaaaggtggaatccttgtggaccgagca
ttcagtaatgggggtttatacagaatatcttgcctaacaatgggaattcatcaactggtt
ttctcacgagggaatttgattggcgatgaccatcctcttccaacaatagagaaagtggaa
ttgtccgttacatgtagtgttccttcatcaatcacactgattgccaatgaaccagtaaat
acacccgagctcatatcttctgcggctcaagatgatcggaccccagacagaatccgtgct
acacctattactgtggcaaacggatgcactattcgagttgctgctgttggcttacatagc
tctggaaaggcgtttgcaaactcatcatctcttggccttaactgggaaatgagtagttgc
gatgggctagctctttgggatgctatcactgtagagagatacaggaccacctccagttgg
gagaggtttttggttttgcagaactcgtcagggctgtgcatcgtccgtgctactgttatt
ggtttttctgataccatgagtgatcatcttcgcgtgagggcttctttattgctagaagaa
aagtcaaagaaccttctcactgacgccatacgtttacagcttgtttcttctctgcgggta
gttccagagtccatcttattattgttcaacccggaagcaaaggcaactctgttaattact
ggagggacatgttccctacatgctgttgtcaatgatactcgagttgcagaagtaattcaa
cccccaaatttggaatgctcacaactgatggttaatcccagagggctgggaactgcactt
gttactgttgatgatgttggacttgctcctcatctgacagcctctgccagggtgcgtgtt
gcagatgtagattggatcaagatcatcgcaaaagaagagatattccttttggtagggagt
gcgcagtcatttaatatcttagcaggtcttcacgatggaactgtgtttgattcctctcag
tatgtttacatgagtattcatgttcattttgaggatcccatactggagcttctcagcatc
aatgcctcaaattctggtgagagttacatctatgggccaggttttgcaattcaagccaat
agtattggggttactactatatatgtcagtgctagactacgatctggacatgaagtatgc
agcgatcctattagagtggaagtctatgcaccaccaaggatacatcctaatcatattttc
ctcgctccaggtgcatcgtacatgcttaccgtgaaagggggcccaagtatcggagtgtac
gtcgggtatacactggacgatgaaactatagcagatattcagaaaacttcaggacggatt
cgagcaatatctccaggaaatagtagcatacatgccaatttttttgggaaaggaagtagt
tttatatgccaggcatatggaagtattgaagtagggattccgtcctctatgatgttgagt
ccacaaagtgagcagcttaatgttggtcgtgaaatgccaatattcccttctttcactgag
ggcaatttattttccttctatgagctctgcaaggattataaatggagtatagaggatgaa
caggtgctgagctatcgaagtgctgagcactctcataaaactcttgtttctggtgctttg
gataccatgtacccaagttactcagacagaaaagatcttgggtttattaatgtagtgtat
ggaaggtcttcaggcaaaacaaatgttgctgtttcgttctcttgtgattttacctcagag
tccttctcactgtcaaagatgtatattgcttctgcatccttgtgggtggtttcttatcct
cctctttctcttggtgtgccaataacctggattctcccacctttttacacgacgtcgaat
ctcttgcctgaatcctataaccaaggggactctcaaggccgtaaaggaactgttatttat
accttgatgagaagctgtggagggaagaatgaagaaatacacaaagatgctatttctatt
gaaggggctaggataaaaacaagtgatagtggcaatcttggttgcattcaagcaaaggat
cgctcgactggaagagctgaaattgcatcttgtgtaagggttgctgaggtagctcaagtt
agagtaacatctaaagagttcgctttctatgtggctgacctagctgttggtgctgagctt
gatcttcttatacattatcatgatgctctaggaaacccatttcatgaagcttacgatgcg
gttcaaatggatgctgatactaattatcctgaagttgtttctattaatagcacccgtgac
agtttcggaaatattcgtttgaaggcgatgcgccatggtagagctcttctacgaatatcg
atgagcaataatcagcaaaagtctgattacttgatggtttctgttggtgcccatttattt
cctcagaatccagtcttgtatgtcggtcgctatattaacttcagtgtaggagggtcggac
aatgtagtatccggtcgctggttaagtgccaatgataatgttgtatctattgatatgctc
tccggggaagcgcttgctcgtggggaaggtaccactcaggtaatatttgaaggttcgaat
ctgaaactgcaaacagctgttacagtgcaaaaagttgacgtggttttggttgattctcca
gaagaaaccttaacaaacatccctttccccacaaaaggatattacttctccattaggttc
agtgacccgtctggacagaacttcgaatcttttagtagcagtaagggagtcaattatgat
tgcagggtagacccaccttatattggttatgcaaaaccatggagagaccttgatcttggt
gttacatattgcctctttttcccttactcaccggaacacttggcacggtcgatacccaag
tcaaagaccatgagaccagatatatctctttctatcactgcttcaatgaaagaattggga
catgtatcaggttcttcaactgcactttttattgggggattctcagtactggaaatggac
aaggatcttctgcggttgaatttgacgccagtatccaacaagagtatgataacgattgtg
gggaacacagacgttgacatctattggcaaaagagggacttgatgagtgtgacccccgtt
atagtatatgagtacgggatgggtgggcaggcggactatgaggtcaaagcgttaagagct
acaaggttcaaagacaaaatcatcatcacactcccagctactggtcaaagagtggaagta
gatgtcagttttgaacctggagaaacacgtttatcatcaaggagtaattttgcgctttgg
gccagtatttttggggttgttactttgttcacgagtttgctcatctacaagaaatttctt
aaccaagctgcaacgtcaaggccaaaatctgctgctccgccagccacccctataagacac
acaatcacacctgaccgtaaccgtagcgtactacagcaatcccctcggactcccgaggtt
ttcgtagagtatgttagagatacaatagacaaaacaccttactataagcgtgatgcagtt
cgaaggcgtaatccacagaatactttttag
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integrated database retrieval system
