Papaver somniferum (opium poppy): 113357485
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Entry
113357485 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase MIEL1-like
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113357485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113357485
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113357485
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113357485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_4
GcpE
Motif
Other DBs
NCBI-GeneID:
113357485
NCBI-ProteinID:
XP_026456675
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All DBs
Position
3:complement(137540142..137542844)
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AA seq
300 aa
AA seq
DB search
MEAGFADNELDFEKINQSFSALTIEAGSADDNERLDFEKMVHGCEHYRRRCRIRAPCCNE
IYHCRHCHNEATSLLSNPKDRHELVRRDVSQVICAVCDTEQEVAHVCSNCGVKMGEYFCQ
VCKFYDDDTEKGQFHCDECGICRVGGRDNFFHCKKCGSCYAISLRDNHICVENAMRNHCP
ICYEYLFDSLKDTQVLKCGHTIHRTCYDEMFEHNRYSCPICSKSTTDLSTVWQRLDQEIE
AVAMPEEYRDTKVWILCNDCNETTEVSFHIFGHKCGHCKSYNTRKISPPGGPKKNVSTSS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgggctttgctgacaatgagctggattttgagaagataaaccagtctttttct
gccctaacaatagaggctggctctgctgatgataatgaacgcctggattttgagaagatg
gttcatggatgtgaacattataggagaagatgtagaattagagctccatgttgtaatgag
atataccattgtcgtcattgtcacaatgaagccacgagcttgttaagcaatcccaaggat
cgtcatgaacttgttagacgtgatgtttcacaagtaatatgtgcagtttgtgatactgag
caggaggttgctcatgtttgttccaattgtggtgttaagatgggagaatacttttgtcaa
gtctgcaaattctacgatgatgataccgagaaaggacaatttcactgtgatgaatgtgga
atctgcagagttggtggccgagacaacttcttccactgcaagaagtgtggttcttgttat
gcgattagtttgcgtgataaccatatttgtgttgagaatgcaatgcgaaaccactgtccc
atctgctatgagtatctttttgattcgttgaaggatacacaagttttgaagtgcgggcat
acgatacatcgcacatgttatgatgagatgtttgagcataatcgatattcttgccctata
tgttcgaaatcaacgacggacttgtctacggtctggcaaagattagatcaagagattgaa
gcagttgcaatgcctgaggaataccgggacaccaaggtttggatcctctgtaatgactgt
aacgagacaactgaagtttcattccacattttcgggcacaagtgtggccactgcaaatca
tacaatacgcggaaaatttcgcctccaggtggtccaaagaaaaacgtgtccacctccagt
tag
DBGET
integrated database retrieval system
