Papaver somniferum (opium poppy): 113358034
Help
Entry
113358034 CDS
T05758
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04075
Plant hormone signal transduction
psom04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
113358034
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
113358034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psom03000
]
113358034
Transcription factors [BR:
psom03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
113358034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
113358034
NCBI-ProteinID:
XP_026457322
LinkDB
All DBs
Position
3:172167063..172170965
Genome browser
AA seq
739 aa
AA seq
DB search
MPNSSSHLHHHRFSNKLDSSSTATTQPTRMTYSSAAATDLDFPPENEFVELVCENGQIMM
HGQSGSRNRKNLSVGGFSSPSSKKDAAGGGGDVVNSKIGSKFGNMDAAAANDFSAATGGP
SSAHHHIGGLNQDDDIGPWLSYPLEDSMQHDYGSDFFSELTGVNLNSLSSSHQTHTAQSQ
NFGVVPFEIKNTSARYSQMITDSNLSTDTTTATRPRSSSINQLECHNSNSSPRPRASDFS
SGDVNQASYRYSKQTPEAAGKVLIPKMQKQDQVPITSTPLGLMNFSYFSRPAALVKANLQ
GISVAPSAGLSSADRTGSKVKMSGFSSNPVESPLIDLTTSSKGVGGFQNPPVQIVSKVDI
DPSTSNPAKELSSAEQSGAISREDASRSTELTDKILRQTSSFAASTNTERPDTDKSVEPP
VASSSMCSGNSAGGTSNDYKHSSKRKSREVDESEYQSEDVEEESAGARKQSNARGGSGAK
RTRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS
MGTGMYMPPMMLPTGMQRMPGQHMPHFPHMGVGMGMGMGMGFGMGILDMGSASSMMQVPP
MHNMQFPCPPLPGHNNFPTMPGSNLQMFGHPGRGIPMPMPHPSYAPPSEGPYAKSVPVPD
VPRTATPAEIPGPASTSSSKDINLQVIQNANVESQQNPKSQQDQEAGDGFKLSTLAQRSD
QSPPVVATEKSTLPTGMGP
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccaaattcatcttctcatcttcatcatcaccgtttcagcaacaaacttgattcatca
tctacagcaacaacacaacccactcggatgacttattcttctgctgctgctactgatctt
gatttcccacctgagaatgaattcgtggagttagtgtgtgaaaacggtcaaattatgatg
cacggccaatcaggtagtaggaacaggaagaatttatctgttggtggtttttcatctcct
tcatctaagaaagatgcagcaggaggaggaggagatgttgtcaattcaaagattggtagt
aagtttggtaatatggatgctgccgccgccaatgatttctcggccgcgactggagggcct
tcttcggcacatcatcacattgggggattgaatcaagatgatgatattggtccatggttg
agttatcctcttgaagattctatgcaacatgattatggttcagatttcttctctgaattg
actggggtcaatctcaattccttgtcttcctctcatcagactcacacggctcagtctcag
aattttggtgtggttccatttgaaattaagaatactagtgctagatattctcagatgatt
acggattccaatttgtccactgacaccaccacagcaactaggcctaggagcagtagtatc
aatcagttagaatgccataattcgaattcatctcctcgaccaagagcttcagatttcagc
agtggtgatgttaaccaggcatcttatagatattcaaagcagacaccagaagcagcaggt
aaagtgcttatcccgaagatgcagaagcaagatcaagttcccatcactagtactcctctg
ggtttgatgaatttttcctacttttcgcgccctgctgcacttgttaaagccaatcttcag
ggcatcagcgttgcacccagtgcaggtttatccagcgcagataggacaggaagtaaggtt
aagatgtctggttttagtagcaaccctgtcgagtcccctctcattgacttgacgactagt
tccaaaggtgttggaggattccaaaatccaccagttcagattgtaagcaaggtggatatt
gatccatcaaccagtaaccctgctaaggaattgtcctctgctgagcagtctggggcaatc
tctcgagaagatgcctctaggagtactgagttgacagataaaattcttcgtcaaacgtcg
agttttgcggcaagtacaaacacagaaaggccagacactgataagagtgtggaaccaccg
gttgcatcttcttcgatgtgctcgggaaacagtgctggaggaacttctaatgattacaaa
cactcctccaagaggaaatctcgcgaagtagatgagtctgaataccaaagtgaagatgta
gaagaagagtctgcaggggcaagaaaacaatctaatgctagaggaggctcaggtgctaag
aggactagagctgcggaagtgcataatttgtctgaaagaagacggagggatagaataaat
gagaagatgcgagcattacaagaactcatacccaactgcaataaggtggacaaagcttca
atgcttgatgaggccattgagtatctgaagactcttcagcttcaagtacagattatgtcg
atgggaacagggatgtatatgcctccaatgatgctacctaccggaatgcaacgtatgcct
ggacaacacatgccgcacttcccacacatgggtgttgggatgggaatgggaatgggcatg
ggttttgggatgggaatactcgatatgggcagcgcttcttcgatgatgcaggtgcctcca
atgcataacatgcagttcccttgcccacctcttccgggacacaataattttcccaccatg
cctggatctaaccttcagatgtttgggcaccctggtcgagggatacccatgccaatgcca
catccatcctatgcccctccatctgaaggcccttacgcaaaatcggttccggtgcctgat
gtcccgagaactgctactcctgctgaaattccaggaccagcatccacgtcaagttccaag
gacattaacttacaagtaattcagaatgcaaacgtcgaaagccagcagaacccaaagtct
cagcaggaccaagaagcaggagatgggtttaagctgtccactctggctcaaagaagcgat
caaagtccgcctgtggtggcaactgagaaatctactcttccaacaggaatgggaccttag
DBGET
integrated database retrieval system
