Polyodon spathula (Mississippi paddlefish): 121294170
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Entry
121294170 CDS
T07273
Name
(RefSeq) metal-response element-binding transcription factor 2-like
KO
K11485
metal regulatory transcription factor 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121294170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121294170
03036 Chromosome and associated proteins [BR:
pspa03036
]
121294170
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121294170
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
121294170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
Tudor_2
PHD
PHD_ash2p_like
Prok-RING_1
SGF29_Tudor
PHD_NSD
zf_RING_Vps8
ASH2L-like_WH
DUF4537
Chromo
PHDvar_NSD
DUF1451
Motif
Other DBs
NCBI-GeneID:
121294170
NCBI-ProteinID:
XP_041073705
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All DBs
Position
18:complement(31193063..31200448)
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AA seq
592 aa
AA seq
DB search
MRDATGVGNLSVHKKTHSHRTHKTPVSLAKVPFKDGQKTKKLARKFEEGQDVLARWSDGL
FYLGTITKINKHKHSCFVVFEDSSKSWVLWKDIQTGASGGGEMVCTICQEENSEAPNEIV
ICDKCGQGYHQTCHAPNIDSSVIGSDEKWLCRQCVFATTTKIGGALKKGPNAKALQVMKQ
ALPYTLEDLVWDEGHKTNIQQCYCYCGGPGDWYLKMLQCSKCRQWFHEACIQCFQKPMLY
GDRFYVFICSVCNSGPEYLKRLPLRWVDIAHLSLYNLSVIHKKKYFDSELELMTYINDNW
DRLQLSDLGDTPKCDRYDNILEALNKNKTMFMSGKEIKKKKHLFGLRIRFPPAPQNTDSK
TAQEPERASHEIKIKGRKSTKPLPDSSEITNGVGRKRKYVGHSLETFAKPRRSSELSTQD
LDEPPVFENNTLDLLSSKMSDKSAQSSSTSDVESTGAASTTETTSTSISKQSSYCISSRR
TRAGRLWPIARPPLRRGRRRGRRPRRTLQTSNPKIDGEEEPKDDCQFSGLDTDLVSNLDQ
EVQLNHLKNSITNYFGAAGRMACGEKYRVLARRVTLDGKVQYLVEWEGVTAS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagagacgctacgggagtggggaatttatctgtccacaaaaaaacgcattcccacaga
acccataagacacccgtgtccttggctaaagtgccattcaaggatggacagaaaacaaaa
aagcttgcgaggaaatttgaagaaggccaggatgtcctagcccggtggtcagatggcttg
ttttatcttgggactatcacaaagataaacaaacataaacacagctgctttgttgtcttt
gaagacagttcgaaatcctgggttctctggaaggacatacaaactggagccagtggtggt
ggggagatggtctgcacaatatgccaggaggaaaactcagaagcaccaaatgagattgtt
atctgtgataagtgtgggcaagggtatcaccagacttgccatgcaccaaatattgattcc
agtgtgattggatcggacgagaagtggctttgtcgccagtgtgtttttgcaacaacgacc
aagataggtggtgctcttaagaaaggaccaaatgccaaagctctgcaagtcatgaagcag
gcgttgccgtacacattggaggacctggtgtgggatgagggccataaaactaatatccag
caatgttattgctattgtggggggcctggagactggtacctgaagatgctgcagtgcagt
aaatgtagacagtggtttcatgaggcctgcatacaatgtttccaaaagccaatgctttat
ggagacaggttctatgtatttatttgttctgtttgcaattctggaccagagtacctcaaa
cgtctaccgttacgatgggtagatatagcacacctgagcctttacaacctaagtgttatt
cataagaaaaaatactttgattcagagctggagctgatgacatacattaatgacaactgg
gacagactacaactttctgatcttggagacactccaaaatgtgacagatacgataatatt
ctagaagcactaaataaaaacaaaaccatgtttatgtctggaaaagaaataaagaaaaag
aaacatttgtttgggctgagaatccgttttcctcctgctcctcagaatacagactcgaaa
acggcacaagagccagagagagcctcccatgaaatcaaaatcaagggcagaaaatctaca
aagcctttaccagacagcagcgaaatcacaaatggagtaggaagaaaaagaaagtatgta
ggtcattcacttgaaacatttgcaaaaccgagacggtcctcagagctctcaacccaggat
ctggatgaaccaccagtgtttgaaaacaataccttggatctgctttcttcaaaaatgagt
gataaatctgcacagtcatcgagtacctcggatgtggaatcgacgggtgctgcaagcacc
actgaaactacctcaacaagcatttcaaaacagtcgagttattgtatctccagcaggaga
acccgtgcaggcagactgtggcccatagctcgcccccctctgagaagagggaggaggcga
ggacgccgacctcgaaggacactccagacttcaaaccccaagatcgacggagaagaggaa
cccaaggacgactgtcagttctcaggattagacaccgaccttgttagcaatttagatcag
gaggtgcagctaaatcacctgaagaattccatcactaattattttggtgctgctggaaga
atggcttgtggggaaaaataccgtgttttggctcgtcgtgtaactctcgacgggaaagtg
cagtatcttgtggaatgggagggagttacagcatcatga
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