Polyodon spathula (Mississippi paddlefish): 121294462
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Entry
121294462 CDS
T07273
Name
(RefSeq) brain-derived neurotrophic factor-like isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121294462
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121294462
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Growth factors (RTK binding)
121294462
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
121294462
NCBI-ProteinID:
XP_041074101
LinkDB
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Position
19:complement(1426735..1451049)
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AA seq
259 aa
AA seq
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MFHQVRRVMTILFLTMVISYFSCMKAAPMKEAPAIRGHGSPGYPSVRSHGTLESAGGPER
GMLSLADTFEQVIEELLEGGGEAQAGTVTTQGGTESKDTDSYTSRVMISSQVPLEPPLLF
LLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSISQWVTAVDKKTAVDMSGQTVTVLE
KVPVPNGQLKQYFYETKCNPIGYTKDGCRGIDKRHYNSQCRTTQSYVRALTMDSKKKIGW
RFIRIDTSCVCTLTIKRGR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttccaccaggtgagaagagtgatgaccatcctgttccttactatggttatttcgtac
ttcagttgcatgaaagctgcccccatgaaagaagctcccgccattcgtgggcacggcagc
cccggctaccccagcgtgcggagccacgggactctggagagcgcaggcgggccggagcgg
ggaatgctgtcactggcagacactttcgagcaggtgatcgaggagctgctggagggggga
ggcgaggcgcaagctggcactgtgaccacgcaggggggcacggagtccaaggacacggac
tcctacacatcgcgggtgatgatcagcagccaagtgcctttggaaccccctctgctgttt
ctcttagaggagtacaaaaactacctggatgcggcgaacatgtccatgagggtccgccgt
cattcagaccccgcccgcaggggagagctcagcgtgtgtgacagtattagccagtgggtg
acggccgtagacaaaaagacggccgtggacatgtcaggacagacggtcaccgtcctggag
aaggtcccggtacccaacggtcaactgaagcaatacttttacgagactaaatgcaacccc
attggatacaccaaggatgggtgcaggggaatagacaagagacactacaattcacaatgt
cggaccacccagtcctacgtgcgtgcactgaccatggatagcaaaaaaaaaattggttgg
cgcttcataagaatagacacttcttgtgtatgtacacttaccattaagagggggagatag
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