Polyodon spathula (Mississippi paddlefish): 121294502
Help
Entry
121294502 CDS
T07273
Name
(RefSeq) oxysterols receptor LXR-alpha-like isoform X1
KO
K08536
liver X receptor alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03320
PPAR signaling pathway
pspa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121294502
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121294502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121294502
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121294502
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121294502
Nuclear receptors [BR:
pspa03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
121294502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
121294502
NCBI-ProteinID:
XP_041074209
LinkDB
All DBs
Position
19:1762586..1785539
Genome browser
AA seq
483 aa
AA seq
DB search
MKTELARPLAHCIDNAGESKVFVSACELQLDSSTEDSSSGLLIEDRHDSSHPPRFNGTVL
GPTWDHETDHFSQDLSPGSLNCALAMDPTDRMKLQVAGDTLDANTGCQPVKRKKGPAPKM
LGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKSAQYACKNGSRCEMDMYMRRKCQE
CRLRKCREAGMLEQCVLSEEQIQLKKMKRQEDETARASTLPQNHFPGAEAPKLAPEQLEM
IEKLVAVQKQCNKSSFIDRLKVTQPCWFLSRQPWPQSQDPLNREVRQQRFAHFTELAIMS
VQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETSRRYNPAIECITFLKDFSYNKE
DFAKAGLQLEFINPIFEFSKGMNDLHLDEAEFALLIAINIFSADRPNVQDHDLVERFQQP
YVDALHSYTRIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWD
VHE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgagctggcacgccctctagcgcactgcattgataatgctggagaaagcaaa
gtgtttgtgtcagcttgtgagctgcagctggactccagcacagaggactcaagcagcggc
ctgctgatcgaagacaggcatgactcctcccatccgcccagattcaacgggacagtgctc
ggccccacatgggaccatgagactgaccacttctcacaggatctctcccctggctctctg
aactgtgccctggccatggaccccactgacaggatgaaactccaagtggctggtgacacc
ctggatgctaacacaggatgtcagcccgtgaagcgtaagaagggcccagccccgaagatg
ctggggaacgaggtgtgcagcgtgtgcggggacaaggcctcgggcttccactacaacgtg
ctgagctgcgagggctgcaagggcttcttccgccgcagcgtgatcaagagcgcgcagtac
gcctgcaagaacggcagccggtgcgagatggacatgtatatgcgccgcaagtgccaggag
tgccggctccgcaagtgcagggaggcgggcatgctggagcagtgcgtgttatcggaagag
cagatccagttaaagaagatgaagaggcaggaagatgagacggccagggcgtcgaccctg
ccccagaatcactttccaggggcagaagcacccaagctcgcacccgagcagttagagatg
atcgagaagctggtggcagttcagaagcagtgtaataagagttccttcattgatcgcctc
aaagtaacgcagccctgttggtttttatcccgacagccgtggcctcagagccaggacccg
ctgaaccgggaggtgcggcagcagcgcttcgctcacttcacagagctggccatcatgtct
gtgcaggagatcgtggacttcgccaagcagctgcctggattcctggagctcacccgcgag
gaccagatcgcactgctcaaaacctccaccatcgagattatgctgttggaaacatccagg
agatacaacccagccatagagtgcatcaccttcctcaaggacttcagctacaacaaggaa
gactttgcaaaagcaggtctgcagttggagtttatcaaccccatctttgagttctccaag
gggatgaacgacctgcatttagacgaagccgagttcgcccttctgattgcaatcaacatc
ttctctgcagaccgcccgaacgtgcaagaccacgatttggtggaacggttccagcagccg
tacgtcgatgcacttcattcctacaccaggatcaagaggccaaatgatcacctgatgttc
ccccgcatgttgatgaagctggtgagccttcgcaccctcagtagtgtccactcggagcag
gtcttcgctctgcggctccaggacaagaaactgccgcctctcctgtctgaaatctgggac
gtccacgaatga
DBGET
integrated database retrieval system
