Polyodon spathula (Mississippi paddlefish): 121294830
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Entry
121294830 CDS
T07273
Name
(RefSeq) N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1-like
KO
K09657
beta-1,4-N-acetylgalactosaminyltransferase 4 [EC:
2.4.1.244
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00513
Various types of N-glycan biosynthesis
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
121294830
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121294830
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.244 N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase
121294830
Glycosyltransferases [BR:
pspa01003
]
Glycan extension
Wide specificity
121294830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
PA14
Motif
Other DBs
NCBI-GeneID:
121294830
NCBI-ProteinID:
XP_041074879
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All DBs
Position
19:8732838..8903719
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AA seq
1152 aa
AA seq
DB search
MLRLPVKKIRKQFKLLLLLVLLTFAVWFTYLHISLVRQGKAIKLHFNYGKDGEKPNEGTD
GGRNRDSRASSNHRKPGDSRDSREDEQGVDGPDQFGGRNGDDSRDSIETKKFLNLKQDTL
PWTPEYKGQANLHVFEDWCGSSVNQLRKNLHFPLYPHTRTVVKKLAVAPKWKNYGLRIFG
YIHPYRDGDFQFAVSSDDNSEFWLSSDENPINARLLVYVGKLGSEWTAPGEFTKFRSQVS
KSVHLIFSRRYYFEVLHKQDDKGSDHIEVGWRPFLPGLKFEVIDSPYISLYTDEASLKMN
SVDHIPQTHASHAGPRDGASQTGQHGADMLKPDARDTFFLTPMIEPSRLENLLPACLYSP
TYVVKDFPIARYQGLQFVYLSFVYPNDFTRLTHMETENKCFYRESPIYLEKFGFYKYMKM
DEEDDDRPFFFPNPENFPDEEEGVDPEDKSLPTESHPFRNETNTSLSDPRLTSRVKRKAY
PPTAIDYEDDVDDYAFRRRQKVFRAKDTQDKETQRSNTKDPPAADLHGNQEVVDFNEPMI
IRGKSLSWIRTGPEELSKKGGDESAVLQHGMPSLFLTSRAKQIVSNSAHAAADTNNNNKD
RKKDQNKTYVTRPRPNRKTVLPRQPREVFPGVFLYQNGKTTKLVNLNTKLNGKGLVSASQ
LRTLFKDNHAPWLSSNITKEAVQGRKASARKWVSLHKKEVGKEKDTNKDTATSAPSTAIK
KVPPPTTLTVKKPETDLNSLETSYMKTSEITETQLLEAEQVDEAEEGGLSDYSYEDTNPR
PGWAEESINWQRTFTVNTMDFELLRSDWNDLRCNVSGNLQLSEAEVVDVLAQYMEKLNER
NGGIYTLLRIINMEKRRDSMRGNRYLIELELMERGRRVVRLSQYIYLLLHRSRHEDSLET
SEGTLPSTTSTLPHTHPQWGNSYSKPLLCQPVRLQWRHDVMVHFVVPVKNQARWVQQFIT
DMEFLHQETKDDNFSVIIVDYESEDMDVEKALRDSKLPRYQYMRREGNFERSAGLQAGVN
SIEDSHSIVFLCDLHIHFPLNIVESVRKHCVEGRLAYAPIVMRLACGSSPREPNGYWEVN
GFGLFGIYKSDFDKIGGMNTEEFRDRWGGEDWELLDRVLQNGLEVERLRLRNFFHYYHSK
RGMWNSKKPPKG
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgattgccggtgaaaaagattcggaaacagttcaaacttcttctgttattggtg
ctgctcacctttgctgtgtggttcacttacctgcacatcagtctggtacggcaagggaaa
gcaatcaagcttcacttcaactatggcaaagatggcgagaagccgaacgaagggactgat
ggcggtcggaacagagactcccgtgcatcgtccaatcacaggaagcctggcgactcacgt
gacagcagagaagacgagcaaggggtggatggaccagaccagtttggaggacgaaatgga
gatgacagtagagattccatagaaacaaagaagttcctcaacctgaaacaggacacgttg
ccatggacaccagagtataaagggcaggctaatctccatgtgtttgaagactggtgtggg
tcatctgtcaatcagctgcgaaagaaccttcacttcccactctatccacacaccaggacc
gtagttaagaaacttgcagtggcccccaaatggaaaaactatggactgcgaatatttgga
tacattcacccatacagagatggtgatttccagtttgcagtctcctccgatgataactcc
gagttttggctgagctctgacgagaacccaatcaatgccaggctgctggtgtatgttgga
aagctgggctctgagtggacggctccaggggaattcaccaaatttcgatctcaagtttcc
aagtctgtccacctcattttttcaagacgttactactttgaagttcttcacaaacaggac
gacaagggctctgaccacattgaagttgggtggcgtccttttctcccagggctgaagttt
gaagttattgattccccctatatctcactttatacagacgaggcctctttgaagatgaac
agcgtagaccacatcccacagacccacgcaagccatgccgggccacgagatggagcgtca
caaactgggcagcacggagctgacatgctgaaaccagatgccagagacaccttcttcctc
actccaatgatagagccgtctcgtctggagaatttgctgcccgcctgcctgtactctccc
acctatgttgtgaaggatttccccatcgctcgctaccagggcctgcagtttgtttacctg
tcgtttgtgtatcccaatgacttcaccagactgacccacatggaaacagagaacaagtgt
ttctacagagagtctcccatctacctggaaaagtttggcttctacaaatacatgaagatg
gatgaggaagacgatgacaggcctttcttctttccaaatccagaaaatttccctgatgag
gaggaaggagtggaccctgaagacaaatctttacctactgagagccatccattcagaaac
gagaccaacaccagcctgtctgacccgcgcttgacttccagggttaaaaggaaggcctac
cctcccactgccatcgactacgaggatgacgttgacgattacgcgttcagacgcaggcag
aaggtgttccgggctaaggacacacaggacaaagagacccagagaagtaacaccaaagac
ccacctgcagctgatctccacggcaaccaggaagtggtggacttcaatgagcccatgatc
atccgggggaaatccctttcctggatccgaactggcccggaggagctgagcaaaaagggg
ggcgacgaatcagcggtgctgcaacacggcatgcccagcctcttcctgactagcagggcc
aagcagatcgtgagcaactctgcccacgctgccgcagacaccaacaacaacaacaaggac
cgcaagaaagaccagaacaaaacctacgtcaccaggccccggccaaacaggaagaccgtg
ttgcccaggcaacccagagaggtcttcccaggtgttttcttgtaccagaacggaaaaacc
accaagcttgtgaatctcaacaccaagctcaatggcaaggggcttgtaagtgcttcccag
ttgaggacccttttcaaggacaaccatgcaccctggctgagcagcaacatcaccaaggag
gctgttcagggacggaaggcctctgcaaggaaatgggtctctttgcacaagaaagaggtg
ggcaaggaaaaggacacaaacaaggacactgccacttcagcaccctctactgccatcaag
aaggtcccaccacccaccactttgacagtaaaaaagccagagacagacttgaattccttg
gagacatcctacatgaagacctcagagatcacagagacgcagcttctggaggcagagcag
gtggacgaggccgaggagggagggctgtctgactacagctacgaggacacgaaccctcgg
ccgggctgggctgaggagtccattaactggcagcgcacctttactgtgaacaccatggac
tttgagctgctgcgttccgactggaacgacctgcgctgcaacgtgtcaggaaacctgcag
ctcagcgaggcagaggtggtggatgtgctggcgcagtacatggaaaaactcaacgagagg
aacggaggtatttacactctgctgcgaatcatcaacatggagaaacggcgggactctatg
cgggggaaccgctacctcattgagctggagctgatggagcgagggaggagggtggtgcgg
ctctcccagtatatctacctgctcctgcaccgcagccgtcatgaagacagcctggagacc
agcgagggcaccctcccctccaccaccagcacactcccacacacacacccccagtggggc
aactcttacagtaagcccctgctgtgccagcccgtccgcctgcagtggagacacgacgtc
atggtgcactttgtggtgccagtaaagaaccaggctcgctgggtccagcagttcatcact
gacatggagttcctgcaccaggaaaccaaggatgacaacttcagtgtcatcatcgtggac
tacgagagcgaggacatggacgtggagaaggcactgagggacagcaagttgccccggtat
cagtacatgaggcgtgaagggaactttgagcgctctgctgggctgcaggctggagtcaac
tctattgaggacagtcacagcattgtgttcctgtgtgacctgcacatccacttccctctc
aacatcgtggagagtgtccggaagcactgcgtggaggggaggctggcctacgcccccatc
gtcatgaggctggcttgtggaagctctccacgggaacccaacgggtattgggaggtaaac
ggttttggcttgtttggcatttacaaatccgactttgacaagatcggagggatgaataca
gaggaattccgggatcgatggggaggcgaggactgggaattactggacagagttcttcag
aatggtttggaggtggagcgattacgacttagaaactttttccattactatcactctaaa
cgaggcatgtggaattcgaagaaaccccccaaaggatag
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