Polyodon spathula (Mississippi paddlefish): 121294899
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Entry
121294899 CDS
T07273
Name
(RefSeq) protein PML-like isoform X1
KO
K10054
E3 SUMO-protein ligase PML [EC:2.3.2.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04144
Endocytosis
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121294899
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121294899
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121294899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121294899
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121294899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PML_CC
ANCHR-like_BBOX
zf-B_box
zf-RING_5
zf-RING_UBOX
zf-C3HC4
IQCJ-SCHIP1
FapA
Motif
Other DBs
NCBI-GeneID:
121294899
NCBI-ProteinID:
XP_041075007
LinkDB
All DBs
Position
19:complement(23046062..23052623)
Genome browser
AA seq
539 aa
AA seq
DB search
MKLSLPRVDMNVSLYNQQPIYTYMRIDYEIAVALFHGGCIQSLLVYKENAACMFVRIMSH
NSDTLQSYSQFLQCGACSCSITSPKLLSCLHSFCQTCLRDQDGSVTCPTCHQTTEKAEVK
DNKLLSDLQSKLVILRQIGRGSDLFCSCCNASAGSMCFECEKFLCQKCFEAHQVFTAKDS
HSVESLESLKEMSFQEFLATARKKRQPYCPDHDKQAISIFCRTCSKSICCTCTVLTHKPH
DYADIKLEAQLQKHDLTQMSTALLEKEKEFVKICQDLLSLQDHGQHHKKELVEQITASVK
EALRKVNQKGEALLEELESLYAVKEVEIKHRIVQMENVLRRIEASRGLVDNMITYAAWKE
VMEMQDFVKSAMWQLQSEQPLNLDSEETTVQFIQTTKEPSDLLGSLVVSNSLSAETEVEA
PCESAAIPIAWKREREEEWDLDPDTEPWISMETSLDAWSSRSHREGSAASTALASPVEHG
TGKNGTSLEESILISSDESNDAFSLVRELFQNKKRKRKCKTPTKRPESTMEHEKQFQMS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatcattaccaagagttgatatgaacgtgagtttatacaaccaacagcctata
tacacatatatgagaatagattatgaaatcgcagtagctctgttccacggagggtgtata
cagagtttacttgtgtacaaagaaaacgctgcatgcatgtttgtacgaatcatgtcccac
aattcagacacattgcaaagctacagccagttcctgcagtgtggtgcctgctcttgtagc
atcacctcccccaagctgctctcctgcctgcacagcttctgtcagacatgtttgagagat
caggacggctctgtcacctgccccacctgccaccagaccaccgagaaggctgaggtgaag
gacaacaagcttttatctgacctgcaaagcaaactggtcatcctgaggcagataggcagg
ggcagtgacctgttctgctcttgctgtaatgcctcggcggggtccatgtgcttcgaatgc
gagaagtttctgtgccagaagtgttttgaagcccaccaggtgttcactgcgaaggacagt
cactcagtggagagcttggagtccctgaaagagatgagcttccaggaattcctggccact
gctcggaagaagaggcagccctactgccccgaccacgacaaacaggcaatcagcatcttt
tgccgaacgtgttccaaatccatctgctgcacatgcacagtcctgacgcacaagcctcat
gactatgctgacatcaagctggaggcccaactgcagaaacatgaccttacccaaatgtcc
accgcgctcctggaaaaagagaaagaattcgtcaaaatctgccaggacctcttgtctcta
caggaccacggtcagcaccataagaaggagctggtagagcaaatcacagcttcggtgaaa
gaagccttgaggaaggtgaaccagaagggagaggccctcttggaagagctggagagcctt
tacgcagtcaaggaggttgagatcaagcacaggatcgttcagatggagaatgtgctgagg
agaatcgaagccagcaggggtctagttgacaacatgatcacctacgcagcttggaaagaa
gtgatggagatgcaggattttgtgaagtcggctatgtggcagctccagagcgagcaaccc
ttgaacttggactcagaagaaaccacagtgcaatttatccaaaccaccaaggaaccaagt
gatctactgggcagtttggtagtgagtaactccttatctgcagaaacagaagtggaggct
ccttgtgaatcggctgccattccgatagcttggaaaagggagagggaggaggaatgggat
ctggatccagatacagaaccctggatcagcatggaaaccagcctggatgcatggtccagc
aggtcccatagagaagggtctgctgctagcacagccctggcttctccagtggagcacggt
acagggaaaaatggcacttcacttgaagagtccatcttgatatcctctgatgaatcaaat
gatgcattttccttggtaagagagctatttcagaacaaaaagagaaaaagaaaatgcaaa
acaccaacaaaaagacctgaatccacgatggaacatgaaaaacagttccaaatgagctaa
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