Polyodon spathula (Mississippi paddlefish): 121295091
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Entry
121295091 CDS
T07273
Name
(RefSeq) protein PML-like isoform X1
KO
K10054
E3 SUMO-protein ligase PML [EC:2.3.2.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04144
Endocytosis
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121295091
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121295091
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121295091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121295091
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121295091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PML_CC
PML_C
zf-B_box
ANCHR-like_BBOX
Exu_RNase_H_like
zf-RING_UBOX
zf-RING_6
zf-C3HC4
zf-RING_5
zf-C3HC4_2
DNA_pol_B_exo1
MCPsignal
SAM_Exu
Motif
Other DBs
NCBI-GeneID:
121295091
NCBI-ProteinID:
XP_041075354
LinkDB
All DBs
Position
19:complement(23029135..23035370)
Genome browser
AA seq
725 aa
AA seq
DB search
MALNSDKFLQCGVCSCSITSPKLLSCLHSFCQTCLRDQGGSHVVTCPTCHQPTEKAEVKD
NKLLSDLQSKLDILRQIGRVGYLSCSCCNASAGSMCFECEKFLCQKCFEAHQVFIAKDSH
LVESLESLKVMSSQEFLATARKKRQPYCPNHDKETISIFCRTCAKSICTTCTVLMHKPPD
HEYRDIKQEAQEQKDNLHKMCTKLCKKEDAFKDILKKLLNLKGDHQSQKKELEEQIKVSV
KEAVRKLEQKGEDLLKELEGIYKGMDAKMSKKLLHMEDVQKRIEGSKDLVEKMIKYATDE
EVMEMQAFVKSSLQQLQRSKPGNANTLDFTVEFKKTDLEQLNLLGSLMVSKDIATGTNLE
ASCIVTSTPIKTKRERQDDEDIKPGTSLASEPPPKRPYTPSLEKPGFSPASLNALPPNVG
QQSDDSLLDYNDDDCEETQSGTSDMLNSGEENDGDMSASQSHLNSSFFKPNLNIETCTLV
FFDLETTGQERAPDIIQLSAIGQDKIFNISIRHSQHFRGSLFHLVQTKTRTEALTAFLAF
LRALVQPTILVGHNIWKNKCPILCRHLDELGLKDQLQESVSGFLDTESLARDNLKGKDIK
KFSQQDLAKVLLKKSYPAHNTLAAVRNLQELYQSLRPAQEKHLFSLVQLEAHISLQPLVL
AMAVTKPSAQTLAQQGISLETMKRAYQEDPKKGLKHLLRHLLNELGPSKLSTIVRNAQTF
FFNQS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggccctaaattcagacaagttcctgcagtgtggtgtctgctcttgtagcatcacttct
cccaagctgctctcctgcctgcacagcttctgtcagacatgtttgagagatcagggcggg
tctcacgttgtcacctgccccacctgccaccagcccaccgagaaggctgaggtgaaggac
aacaagcttttatctgacctgcaaagcaaactggacatcctgaggcagataggcagggtt
ggttacctgtcctgctcttgctgtaatgcctcggcggggtccatgtgcttcgagtgcgaa
aagtttctgtgccagaagtgttttgaagcccaccaggtgttcatagcgaaggacagtcac
ttagtggagagcttggagtccctgaaagtgatgagctctcaggaattcctggccactgct
cggaagaagaggcagccctactgccccaaccacgacaaagagacaatcagtatcttctgt
cgaacctgtgccaagtccatttgcaccacttgcactgtactgatgcacaagcctcccgat
catgagtacagggacatcaagcaagaggcccaagagcagaaggataatcttcataaaatg
tgcactaagctgtgtaagaaggaggatgccttcaaagacatcttgaagaagctgttgaat
ctgaagggcgaccatcagtcccaaaaaaaggagctagaagaacagatcaaggtgtcagtg
aaagaagccgtgaggaagttggagcagaaaggagaagacctgttgaaagagctggaggga
atttacaagggcatggatgccaagatgagcaagaagctgcttcacatggaggatgtgcag
aagagaattgaaggcagcaaggatctggtggagaaaatgatcaagtatgccactgatgaa
gaagtgatggagatgcaggcgtttgtgaaatcgtctctgcagcagctccagagaagtaag
cctgggaatgcaaacacactggacttcacagtagagtttaagaaaactgacctggagcaa
ctcaacctattgggcagcctaatggtgagtaaagatattgctacaggaacaaatttggag
gcaagttgcattgtaacttcaacaccgataaagactaaaagagagaggcaggatgatgaa
gacattaaacctggaacatctttagcctctgaaccaccacctaagcgcccttacacacct
tcccttgaaaagccaggtttcagtccagcttcactgaatgctttacctcctaatgttggg
caacaaagtgatgattccctactggattacaatgatgatgactgtgaagagacacaatct
gggacctctgatatgctgaatagtggcgaggagaatgatggggatatgagtgcctcccag
tcacacctgaacagctctttcttcaaacccaacctcaacatagaaacctgcacccttgtg
ttttttgacttggagaccactggacaagaacgcgcacctgatattatccagctgtctgct
atcggccaagacaagatttttaacatctccatacgacattcccagcatttcagaggatct
ctcttccatctggttcaaaccaagacccgcactgaggccctgacggccttcctggccttc
ctccgcgcgctggttcagcctacaatactagtagggcacaacatctggaagaacaagtgc
cccattctgtgtaggcatcttgatgaactcggcctgaaagatcagttgcaggagtcagtg
tccggctttctggacactgaatctttggctagagacaacttaaaaggcaaagacatcaag
aagttttcccagcaggatctggcaaaggtgttgctcaaaaaatcatatccagcgcacaac
actttagcagccgtcagaaatttgcaggagctctaccaatccttacgccctgcacaagag
aagcacctgttctcccttgttcagttggaagctcacatttctctgcagcctctagtcttg
gcgatggctgtcactaaaccctcagctcagacactggctcaacagggtatcagtttagag
accatgaagcgagcatatcaggaagatcctaaaaagggcttgaagcatttgttgagacat
ctgctcaatgagctgggtcccagcaaactttctacaatcgtcagaaacgcacagaccttt
ttttttaatcaaagctag
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