Polyodon spathula (Mississippi paddlefish): 121295176
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Entry
121295176 CDS
T07273
Symbol
kdrl
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04510
Focal adhesion
pspa04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121295176 (kdrl)
04020 Calcium signaling pathway
121295176 (kdrl)
09133 Signaling molecules and interaction
04518 Integrin signaling
121295176 (kdrl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121295176 (kdrl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pspa01001
]
121295176 (kdrl)
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121295176 (kdrl)
Protein kinases [BR:
pspa01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
121295176 (kdrl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_VEGFR-1-like_5th
Ig_3
VEGFR1-3_N_Ig-like
I-set
Pkinase
Ig_2
ig
VEGFR-2_TMD
V-set
Ig_PDGFR_d4
VEGFR-1-like_Ig-like
C1-set
C2-set_2
Ig_SEMA-3_4_7A
Haspin_kinase
ABC1
Motif
Other DBs
NCBI-GeneID:
121295176
NCBI-ProteinID:
XP_041075514
LinkDB
All DBs
Position
20:4444321..4498025
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AA seq
1305 aa
AA seq
DB search
MFPVDINAFIFAAISICLVGLTDSVRISPPKLTPSDEQHVIEAGGTLTITCRGLAPLMWA
WPPLLDSDSGRLRIDECDCLPGRETHCSALTISSAQYRDTGYYSCNYTHSTDSMVSRTYV
FVKDDENPFVEPHIHFPESLLIETGNTELVVPCRVTSPDLKVTLTTIPSWNFESLDAQWD
PKIGFTMSPYVHNILKCITNVKGKETHTLYMPVKIAPDILNLKMEPTRVKLLAGDTLSIN
CSAQTHYNGRVKLQWDYPRKLLNGSVTLTKSMDRSTQVYTTYSKLVLHNATMADRGTYTC
IGINKYKMDVSTKVNVYEHPFINATHKTRPVIEVHEGRKKLRIVARVNALPAPEIAWYKD
GFLIKENHTCYKQNDSILSINDIKEKDAGRFTIALSNKKHGLYKNLTFTLIVNTRPQIYE
EEVAAVDLYPHQLGEEQRLTCTSYGVPAPQIFWNWQPCNPDPSNTVCEKQEAQQVQVWTG
GSEEDLHMTNRIEAIENKIEIHKGKNKTVSTLVVAEAKVSGTYQCIAFNKEGFDKRNIDF
YVTDSQKSFETKSQTAIEGHNVSLTCLATRYMYKELSWHYPSNETVADVSLEYGTYSIKL
SFALKNVSTEDAGLYECRAHDVYHNTTIRQKAELLVVERKVPWLQQNLTNQDVNSSSTLI
LGCHADGVPTPYVTWYKNGEPVQPAPGITLGADGLLTIERVKKDDGGLYECWASNDEGEV
KTAAIITVLGLEEKSNWEVIVLVCTGLVATLFWLLLTLFIRKLKKPSSADIKTGYLSIIM
DPDEVPLDEQCDRLPYDSSKWDFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCKTVA
VKMLKDGATTNECKALMSELKILIHIGHHLNVVNLLGACTKPGGALMVIVEFCKYGNLSN
YLRSKRSDFVVYKSEEGSRGESSPDLTELIKRRLESVASTGSSASSGFIEDKSYCDSEEE
EEDADDLYKRALTMEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFG
LARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYSTQSDVWSFGVLMWEIFSLGASPYPG
LHIDEEFCCRLKEGTRMRAPEYASSEIYQTMLDCWEGEPTERPNFTELVERLGDLLQAKV
QQDGKDYIPINTLLAEGQETSSTSTEDETSSTSVNQRHSGGTWNTKIRPVSVKTFDKVPV
DNKTNGLQEEGESDSGMVLASEEMKSVKRLETRAQPLSIMALAMKAVSKSKESVLSDGEK
ETKYLQEPLDFNLEHSVLLQMDPNLECHSPPPDYNYVVRYSAPPV
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgttcccagtggacattaacgcatttatattcgctgctatttctatctgcctggtcggg
ctgaccgacagtgtcaggatctctccaccaaagctgaccccttcagatgaacagcatgtg
attgaggctggaggcactctaacaataacttgcaggggactggctccgctcatgtgggcg
tggcccccacttctagactcagacagtgggaggctgaggatcgatgagtgcgactgtctg
cctgggagggagacccactgcagtgcgctgaccatcagcagcgctcagtacagagacaca
ggctattactcctgcaactacacacattccacagacagcatggtcagcagaacgtatgtg
tttgtgaaagatgatgaaaatccatttgtggaacctcacatacattttcctgaatccctg
ctcatagagactggcaacacagagctggtggtgccttgtagagtcacatccccagacctc
aaagtcaccttgacaacgattccttcttggaactttgaaagcctagatgctcaatgggac
cccaagattggctttaccatgtcaccttatgttcataatatactgaaatgtataaccaat
gtgaaaggaaaggagacacacaccctttatatgccagtgaaaatagctccggacatcctt
aacttaaagatggagccgacgcgagtgaagcttctggctggagacacactttcgatcaat
tgctctgcacagacccattacaatggaagagtaaaattacagtgggactacccccggaaa
ttgttaaacggttcagtcacactgacaaagagcatggacaggtcaacccaggtctacaca
acctacagcaagctggtcctgcacaatgccaccatggcagacagaggcacttacacatgc
atcggaatcaacaaatacaaaatggatgtatccaccaaggtcaatgtctatgaacatcct
ttcattaacgctactcataaaaccagacctgttattgaagtccatgaggggcggaagaag
ctgagaatcgtggcgagggtcaatgcattaccagccccagagattgcatggtacaaagat
ggtttcctaattaaggaaaaccacacctgctacaagcaaaatgactctattctcagcatc
aatgacattaaagaaaaggatgctgggagattcaccattgctctgagcaataagaagcat
ggtttatataagaacctcacattcacactgattgtcaatacgaggccgcagatctacgag
gaggaggtggcggctgtagatctgtatccacaccagctgggggaagagcagcgcctgacc
tgcacttcatacggtgtccctgccccccagattttctggaattggcaaccctgcaatcct
gatccctccaatactgtatgtgaaaagcaggaggcacagcaagtccaggtttggacagga
ggcagtgaggaggacctgcacatgaccaacaggattgaggctattgagaataaaattgaa
atccacaaagggaagaacaagactgtgagcactttggttgtagcagaggcaaaagtgtct
ggaacttatcagtgcattgctttcaacaaagaaggctttgacaaacgcaatattgatttc
tatgtaacagattcccagaagtcttttgaaaccaaatctcaaacagccatcgagggacat
aacgtcagtctcacatgccttgccacaaggtacatgtataaggagctgagctggcactac
cccagcaatgagacggtggccgacgtgtccttggagtatgggacatactccatcaagctg
tccttcgccttgaagaacgtgtccactgaggacgctggcctctatgagtgcagagcacac
gatgtgtaccacaacacaacgattcggcagaaggcagagctccttgttgtagaacgcaag
gtcccttggttacagcagaaccttacaaaccaggatgtgaacagcagcagcacgctgatt
ctagggtgccatgccgacggggtgcccactccttacgtcacctggtataaaaatggagag
ccggtccagccagcccctggtattaccctaggggctgatggtttattgaccatcgaaagg
gtgaagaaagacgatggaggactgtacgagtgctgggcgagcaacgacgaaggagaagtg
aaaacagctgccatcatcactgtgctgggactagaagagaagtctaactgggaggtaatt
gtcctggtttgtactggtctggtcgccactctcttctggctgctgctgaccctgttcatc
cgcaaactgaagaagcccagctctgcagacattaaaaccggctacctgtcaatcataatg
gacccagacgaagtgcctctggacgagcagtgtgaccgcctgccttacgacagcagcaag
tgggacttcccgagagacaggctgaggctgggtaaaactcttggccacggagcttttggg
aaggtggttgaggcgtctgcttttggaatcgataaattatcaacctgcaagaccgtggct
gtcaaaatgttaaaagacggggctacaaccaatgagtgcaaggccctaatgtcagagctg
aaaatcctgattcacattggccatcacctgaatgtagtgaacctgctgggagcatgtacc
aagccagggggtgctctgatggtgatcgtggaattctgcaagtatggaaacctgtctaac
tatctgagaagcaagagaagtgattttgttgtgtacaagagcgaggagggttccagaggg
gagtcgagtcctgacctgacagagctgatcaagaggaggctggagagcgtggcgagtact
gggagctcagccagctcggggttcatagaagataagagctactgtgattcagaggaagag
gaggaagatgctgacgatttatacaagcgagctctgaccatggaagacctgatctgttac
agctttcaagtagcgaaaggcatggaatttctggcatcacggaaatgtatccaccgtgac
ttggcagccagaaatatccttttgtctgaaaacaatgttgtgaagatatgtgactttggg
ctggccagggacatttacaaagacccagattatgtgcgcaaaggagatgccagacttccc
ctcaaatggatggcacctgaagctatttttgacaagatctactcaacgcagagtgatgtg
tggtcattcggtgtgctcatgtgggagatattttctctcggtgcctccccctaccctggt
ctacacattgatgaggagttctgctgccgactaaaggaagggacacggatgagagctcct
gagtacgcctcctctgaaatctatcagacgatgctagattgctgggaaggggaacctact
gaaagaccaaacttcacagagctggtggagcgactgggagacctgttacaggccaaagtc
cagcaggacggcaaggattacattccaataaacacactgctggccgagggacaggagacc
tccagcacctctacagaggatgagacctcaagcacatctgtgaatcagagacactcaggg
ggaacatggaacacaaaaatacgtcccgtcagtgtgaagacctttgataaggtccctgta
gacaacaaaacaaacggactgcaggaggagggagagtcggacagcgggatggtgctggcc
tctgaagagatgaagagtgtgaagagactggaaacgcgagcccagcccttaagcataatg
gctttagcaatgaaagcagtgagcaaaagtaaagaatcagtgttgtccgatggggagaag
gagacaaagtacctgcaggagcccctcgatttcaacctggagcactccgttctcctccaa
atggaccccaacctggaatgccacagccccccgccagactacaactatgtcgtccgctac
tctgcaccgccagtgtag
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