Polyodon spathula (Mississippi paddlefish): 121295176
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Entry
121295176 CDS
T07273
Symbol
kdrl
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121295176 (kdrl)
04020 Calcium signaling pathway
121295176 (kdrl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121295176 (kdrl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pspa01001
]
121295176 (kdrl)
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121295176 (kdrl)
Protein kinases [BR:
pspa01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
121295176 (kdrl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
ig
Ig_VEGFR-1-like_5th
VEGFR-2_TMD
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
C1-set
C2-set_2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
121295176
NCBI-ProteinID:
XP_041075514
LinkDB
All DBs
Position
20:4444321..4498025
Genome browser
AA seq
1305 aa
AA seq
DB search
MFPVDINAFIFAAISICLVGLTDSVRISPPKLTPSDEQHVIEAGGTLTITCRGLAPLMWA
WPPLLDSDSGRLRIDECDCLPGRETHCSALTISSAQYRDTGYYSCNYTHSTDSMVSRTYV
FVKDDENPFVEPHIHFPESLLIETGNTELVVPCRVTSPDLKVTLTTIPSWNFESLDAQWD
PKIGFTMSPYVHNILKCITNVKGKETHTLYMPVKIAPDILNLKMEPTRVKLLAGDTLSIN
CSAQTHYNGRVKLQWDYPRKLLNGSVTLTKSMDRSTQVYTTYSKLVLHNATMADRGTYTC
IGINKYKMDVSTKVNVYEHPFINATHKTRPVIEVHEGRKKLRIVARVNALPAPEIAWYKD
GFLIKENHTCYKQNDSILSINDIKEKDAGRFTIALSNKKHGLYKNLTFTLIVNTRPQIYE
EEVAAVDLYPHQLGEEQRLTCTSYGVPAPQIFWNWQPCNPDPSNTVCEKQEAQQVQVWTG
GSEEDLHMTNRIEAIENKIEIHKGKNKTVSTLVVAEAKVSGTYQCIAFNKEGFDKRNIDF
YVTDSQKSFETKSQTAIEGHNVSLTCLATRYMYKELSWHYPSNETVADVSLEYGTYSIKL
SFALKNVSTEDAGLYECRAHDVYHNTTIRQKAELLVVERKVPWLQQNLTNQDVNSSSTLI
LGCHADGVPTPYVTWYKNGEPVQPAPGITLGADGLLTIERVKKDDGGLYECWASNDEGEV
KTAAIITVLGLEEKSNWEVIVLVCTGLVATLFWLLLTLFIRKLKKPSSADIKTGYLSIIM
DPDEVPLDEQCDRLPYDSSKWDFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCKTVA
VKMLKDGATTNECKALMSELKILIHIGHHLNVVNLLGACTKPGGALMVIVEFCKYGNLSN
YLRSKRSDFVVYKSEEGSRGESSPDLTELIKRRLESVASTGSSASSGFIEDKSYCDSEEE
EEDADDLYKRALTMEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFG
LARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYSTQSDVWSFGVLMWEIFSLGASPYPG
LHIDEEFCCRLKEGTRMRAPEYASSEIYQTMLDCWEGEPTERPNFTELVERLGDLLQAKV
QQDGKDYIPINTLLAEGQETSSTSTEDETSSTSVNQRHSGGTWNTKIRPVSVKTFDKVPV
DNKTNGLQEEGESDSGMVLASEEMKSVKRLETRAQPLSIMALAMKAVSKSKESVLSDGEK
ETKYLQEPLDFNLEHSVLLQMDPNLECHSPPPDYNYVVRYSAPPV
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgttcccagtggacattaacgcatttatattcgctgctatttctatctgcctggtcggg
ctgaccgacagtgtcaggatctctccaccaaagctgaccccttcagatgaacagcatgtg
attgaggctggaggcactctaacaataacttgcaggggactggctccgctcatgtgggcg
tggcccccacttctagactcagacagtgggaggctgaggatcgatgagtgcgactgtctg
cctgggagggagacccactgcagtgcgctgaccatcagcagcgctcagtacagagacaca
ggctattactcctgcaactacacacattccacagacagcatggtcagcagaacgtatgtg
tttgtgaaagatgatgaaaatccatttgtggaacctcacatacattttcctgaatccctg
ctcatagagactggcaacacagagctggtggtgccttgtagagtcacatccccagacctc
aaagtcaccttgacaacgattccttcttggaactttgaaagcctagatgctcaatgggac
cccaagattggctttaccatgtcaccttatgttcataatatactgaaatgtataaccaat
gtgaaaggaaaggagacacacaccctttatatgccagtgaaaatagctccggacatcctt
aacttaaagatggagccgacgcgagtgaagcttctggctggagacacactttcgatcaat
tgctctgcacagacccattacaatggaagagtaaaattacagtgggactacccccggaaa
ttgttaaacggttcagtcacactgacaaagagcatggacaggtcaacccaggtctacaca
acctacagcaagctggtcctgcacaatgccaccatggcagacagaggcacttacacatgc
atcggaatcaacaaatacaaaatggatgtatccaccaaggtcaatgtctatgaacatcct
ttcattaacgctactcataaaaccagacctgttattgaagtccatgaggggcggaagaag
ctgagaatcgtggcgagggtcaatgcattaccagccccagagattgcatggtacaaagat
ggtttcctaattaaggaaaaccacacctgctacaagcaaaatgactctattctcagcatc
aatgacattaaagaaaaggatgctgggagattcaccattgctctgagcaataagaagcat
ggtttatataagaacctcacattcacactgattgtcaatacgaggccgcagatctacgag
gaggaggtggcggctgtagatctgtatccacaccagctgggggaagagcagcgcctgacc
tgcacttcatacggtgtccctgccccccagattttctggaattggcaaccctgcaatcct
gatccctccaatactgtatgtgaaaagcaggaggcacagcaagtccaggtttggacagga
ggcagtgaggaggacctgcacatgaccaacaggattgaggctattgagaataaaattgaa
atccacaaagggaagaacaagactgtgagcactttggttgtagcagaggcaaaagtgtct
ggaacttatcagtgcattgctttcaacaaagaaggctttgacaaacgcaatattgatttc
tatgtaacagattcccagaagtcttttgaaaccaaatctcaaacagccatcgagggacat
aacgtcagtctcacatgccttgccacaaggtacatgtataaggagctgagctggcactac
cccagcaatgagacggtggccgacgtgtccttggagtatgggacatactccatcaagctg
tccttcgccttgaagaacgtgtccactgaggacgctggcctctatgagtgcagagcacac
gatgtgtaccacaacacaacgattcggcagaaggcagagctccttgttgtagaacgcaag
gtcccttggttacagcagaaccttacaaaccaggatgtgaacagcagcagcacgctgatt
ctagggtgccatgccgacggggtgcccactccttacgtcacctggtataaaaatggagag
ccggtccagccagcccctggtattaccctaggggctgatggtttattgaccatcgaaagg
gtgaagaaagacgatggaggactgtacgagtgctgggcgagcaacgacgaaggagaagtg
aaaacagctgccatcatcactgtgctgggactagaagagaagtctaactgggaggtaatt
gtcctggtttgtactggtctggtcgccactctcttctggctgctgctgaccctgttcatc
cgcaaactgaagaagcccagctctgcagacattaaaaccggctacctgtcaatcataatg
gacccagacgaagtgcctctggacgagcagtgtgaccgcctgccttacgacagcagcaag
tgggacttcccgagagacaggctgaggctgggtaaaactcttggccacggagcttttggg
aaggtggttgaggcgtctgcttttggaatcgataaattatcaacctgcaagaccgtggct
gtcaaaatgttaaaagacggggctacaaccaatgagtgcaaggccctaatgtcagagctg
aaaatcctgattcacattggccatcacctgaatgtagtgaacctgctgggagcatgtacc
aagccagggggtgctctgatggtgatcgtggaattctgcaagtatggaaacctgtctaac
tatctgagaagcaagagaagtgattttgttgtgtacaagagcgaggagggttccagaggg
gagtcgagtcctgacctgacagagctgatcaagaggaggctggagagcgtggcgagtact
gggagctcagccagctcggggttcatagaagataagagctactgtgattcagaggaagag
gaggaagatgctgacgatttatacaagcgagctctgaccatggaagacctgatctgttac
agctttcaagtagcgaaaggcatggaatttctggcatcacggaaatgtatccaccgtgac
ttggcagccagaaatatccttttgtctgaaaacaatgttgtgaagatatgtgactttggg
ctggccagggacatttacaaagacccagattatgtgcgcaaaggagatgccagacttccc
ctcaaatggatggcacctgaagctatttttgacaagatctactcaacgcagagtgatgtg
tggtcattcggtgtgctcatgtgggagatattttctctcggtgcctccccctaccctggt
ctacacattgatgaggagttctgctgccgactaaaggaagggacacggatgagagctcct
gagtacgcctcctctgaaatctatcagacgatgctagattgctgggaaggggaacctact
gaaagaccaaacttcacagagctggtggagcgactgggagacctgttacaggccaaagtc
cagcaggacggcaaggattacattccaataaacacactgctggccgagggacaggagacc
tccagcacctctacagaggatgagacctcaagcacatctgtgaatcagagacactcaggg
ggaacatggaacacaaaaatacgtcccgtcagtgtgaagacctttgataaggtccctgta
gacaacaaaacaaacggactgcaggaggagggagagtcggacagcgggatggtgctggcc
tctgaagagatgaagagtgtgaagagactggaaacgcgagcccagcccttaagcataatg
gctttagcaatgaaagcagtgagcaaaagtaaagaatcagtgttgtccgatggggagaag
gagacaaagtacctgcaggagcccctcgatttcaacctggagcactccgttctcctccaa
atggaccccaacctggaatgccacagccccccgccagactacaactatgtcgtccgctac
tctgcaccgccagtgtag
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