Polyodon spathula (Mississippi paddlefish): 121295240
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Entry
121295240 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor 2-like
KO
K05198
glutamate receptor 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121295240
04082 Neuroactive ligand signaling
121295240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121295240
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Glutamate (ionotropic)
121295240
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
DUF2061
Motif
Other DBs
NCBI-GeneID:
121295240
NCBI-ProteinID:
XP_041075615
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All DBs
Position
2:30769500..30823319
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AA seq
931 aa
AA seq
DB search
MFSLEMQKIMHLSVFLVPVFLGLAFGGSSSVQIGGFISKGCTIRNTDAFRIGMVQFATPE
FRLTPHIDNLEVQTVFAVTNCFCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPS
FPADGLHQFVLQMRPDVKGALLSLIEYYQWDKFAYLYDSDRGLSTLQVVLDTAAEKKWQV
TAINVGNLKDEKKDEAYRSLFQDLEIKKERRVILDCEQDKVKDIMEQVITIGRHVKGYHY
IIANLGFIDGDLSKIQYGGANVSGFQIVDFDDPVVSKFDQRWEALEEKEYPGADNRIRYT
SALTYDAVQVMTEAFRYLRKQRIDISRRGNAGDCLANPAVPWAQGVEIERALKQVHVEGL
TGNIQFDQYGRRINYTVNVMELKNSGPRKIGYWNEVDKMVVTAIDFSPGNDSTGMENKTV
IVTTILEAPYVMLKKNYELFEGNDMYEGYCVDLAAEIAKHCGFKYKLSIVPDGKYGARDA
ETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVF
SFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEYEDGQIQSNESTNEFGIFNS
LWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESA
EDLAKQSEIAYGTLDSGSTKEFFRRSKIALFDKMWTYMKSAEPSVFVKTTAEGVARVRKS
KGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQ
GLLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCY
KSRAEAKRMKVAKNAQNINPNPSQNSQNFATYKEGYNMTFGDAMRSKARLSITGSTGENG
RVMTPEFPKAVHAVSYVRPGMGMNVNVTDLS
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgttttctttggaaatgcaaaagattatgcatttatctgtcttccttgttcctgttttt
ttgggactggcgtttggtggctcttccagtgtacaaattgggggttttatttccaagggg
tgcacgatcaggaatacagatgcatttcgaataggaatggttcagttcgccactcctgag
tttagactgacgccccatattgacaatctggaagtgcaaacagtttttgctgtcaccaat
tgtttctgttcccagttttcaagaggagtctatgctatttttggattctatgataagaag
tctgtaaatactataacatcattttgtggaactctacacgtctcttttataacaccaagc
tttcctgcagatggattacatcagtttgttttacagatgcgaccagatgtcaagggtgct
cttcttagtttgattgagtactatcagtgggacaaatttgcatatctgtatgacagtgat
agaggtttatcaacactgcaagtagtactggatactgctgctgaaaagaaatggcaagta
acagcaatcaatgtaggcaacctcaaagatgaaaagaaagacgaagcttaccgctctctg
tttcaagatcttgagatcaagaaagaaaggagggtgattctggactgtgagcaagacaaa
gtgaaagacattatggaacaggtcattaccattggaagacatgttaaaggataccactac
atcattgcaaacctgggattcatagatggggatttgtccaaaattcagtatggcggagcc
aacgtatcaggatttcagattgttgattttgatgacccagttgtctcaaaattcgatcag
cggtgggaagctttagaggaaaaagaatatcctggggcggacaacagaattaggtacacg
tctgccttgacttacgatgctgtgcaagtgatgaccgaagccttccgctacctgcgcaaa
cagaggattgacatctccaggagaggcaatgccggtgactgtctggcaaaccctgctgta
ccctgggcccaaggagttgaaatagaaagagccttgaaacaggtccatgtggaaggcttg
actggaaacatacagtttgatcagtacgggagaagaattaactatacggttaatgttatg
gagttaaaaaacagtggtccgcggaagattggttattggaatgaagttgacaaaatggtt
gttacagcaattgatttctcccctgggaatgactccaccggcatggaaaataagacagta
attgtgacaacaattttggaagcaccgtatgtaatgctgaaaaaaaattatgagctattt
gaaggcaatgacatgtatgaaggttactgtgtggatctggcagcagaaatagctaaacat
tgtgggttcaagtacaagctatctatcgtacctgatggaaagtatggagccagggatgcg
gaaaccaaaatttggaatggaatggtgggagaacttgtgtatgggaaagctgacatagct
gtggctccattaaccatcaccctggtgcgagaagaagtgatagacttttcaaagcccttt
atgagcctggggatctccatcatgattaagaagcctcagaaatccaagcccggggtgttt
tccttcctagatcccctggcatacgaaatctggatgtgcatagtgtttgcctacatcggg
gtcagtgtggttctgttcctagtcagtcgcttcagcccctatgagtggcacaccgaggaa
tatgaagacggacaaatacaaagtaacgaatccacaaatgaatttgggatatttaatagt
ctctggttttctcttggtgcctttatgcagcaaggatgcgatatttcgccaagatctctc
tctgggcgaattgttggaggggtatggtggttctttaccttgatcataatctcatcctac
acggctaacttagctgctttcctgactgttgaacggatggtgtccccaattgaaagcgca
gaggatctcgctaaacaatcagagattgcttatggaacgctggactctggctcaacaaaa
gaattttttaggagatctaaaattgcactgtttgataaaatgtggacctatatgaaaagc
gctgagccgtccgtgtttgtgaagacaaccgcagagggtgtcgcccgtgtacggaagtcc
aaagggaaatacgcttatctgctggagtccacgatgaacgagtatatcgagcagaggaag
ccatgcgacaccatgaaggtcggagggaacctggactcaaagggctacggcattgcaacg
cctaaaggatcctcattaagaaatgcggttaacctcgcagtactaaaactgaatgaacaa
ggcctcttggacaaattgaaaaacaaatggtggtacgacaaaggagagtgcggcagcggg
ggaggtgattccaaggagaagacaagtgcactaagcctgagcaacgttgctggagtgttc
tacattctcgtcggcggacttggtttggcaatgctggtggctttgattgagttctgttac
aagtcaagagcagaggcgaaacgaatgaaggtggcaaagaatgcacagaatattaaccca
aatccctcgcagaattcgcagaattttgcaacttataaggaaggttacaacatgaccttt
ggtgatgccatgagaagcaaagcaagactgtcaattacaggaagcactggagaaaacggc
cgtgtgatgactccagaatttccaaaagcagtgcatgcagtatcttacgtgagacctggc
atgggaatgaatgtcaatgtgactgatctctcttga
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