Polyodon spathula (Mississippi paddlefish): 121295567
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Entry
121295567 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04210
Apoptosis
pspa04217
Necroptosis
pspa04510
Focal adhesion
pspa04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121295567
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121295567
04217 Necroptosis
121295567
09144 Cellular community - eukaryotes
04510 Focal adhesion
121295567
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121295567
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121295567
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121295567
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121295567
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121295567
Peptidases and inhibitors [BR:
pspa01002
]
Peptidase inhibitors
Family I32: IAP family
121295567
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121295567
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121295567
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
UBA_BIRC2-3
Prok-RING_4
DUF2039
Motif
Other DBs
NCBI-GeneID:
121295567
NCBI-ProteinID:
XP_041076284
LinkDB
All DBs
Position
20:complement(2947186..2955946)
Genome browser
AA seq
461 aa
AA seq
DB search
MAYSQSDKDLESDNCGDMSEIHTRLQSFHNFPRDNLVSPQRLARAGFFFTGNSDRVRCFS
CNHTVENWSSGDAPVERHQQVSPSCTYLSCTHRVQPATLNGHVAPSTNNASYDEESEDLE
YRLRTGEVVDETDYPKHPDMCSEEARLDTFQSWPPSAPVRPRELAQAGFYYTSSRDRVEC
FCCGGVLGNWEPGDEAWKEHERHFSNCFFILGHEVGNIPCQQSPDMDRVPYMGSYEERLR
SFTGRQHPVDPERLARSGFYSTGELDQVMCFHCAGGLKGWQAAEDPWEEHAKHYPGCSFL
IAEKGQAFVNSIQLGNPCRNSAAERVPNGLAVRQEDLGIMQSSVVQKALEMGFDAADVER
TAREGLRKTGVEYNSVEALISDLTSAESESDETQDNKEEDPMEKLRKLQQEKLCKVCMDK
NIAIVFIPCGHLATCKKCSEVLSKCPICCTPIKQKVKTYIS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcttattcccagtctgacaaagaccttgaatcggacaactgtggggatatgtctgaa
atccacacacggctccagtcattccataacttccccagggataacctggtgtctcctcag
aggctggccagagctggcttcttcttcacaggcaactctgaccgggtcaggtgcttcagc
tgcaatcacaccgtggagaactggagcagtggggacgcccctgtagagaggcatcagcag
gtgtccccttcctgcacgtacctgagctgcacgcacagagtccagccagccacgctcaat
ggacacgtggccccatcaaccaacaatgcttcgtacgacgaggaaagcgaggatctggaa
taccgcctgcgaacgggagaggttgtggacgagactgactatccaaaacaccctgacatg
tgcagcgaggaagccaggctggacaccttccaatcgtggcccccgtctgcccctgtgagg
ccccgggagctggcccaggccgggttctattacacgagctccagggaccgggtcgagtgc
ttctgttgcgggggcgtgctggggaactgggagcctggagatgaagcctggaaggagcac
gagaggcacttcagcaactgcttcttcatcctgggccatgaagtggggaacattccttgc
cagcagtcccctgacatggatagagttccgtacatgggatcctatgaggagcgtctccgc
agcttcactggcaggcagcatcctgttgacccagagaggctggcgaggtctggcttttac
agcacaggtgagttggaccaggtgatgtgtttccactgtgcagggggtctgaagggctgg
caggctgctgaggacccctgggaggaacatgccaaacactatccagggtgtagctttctt
attgcggagaaaggccaagcgtttgtgaacagtatccagttagggaatccctgcaggaac
tctgctgcagaacgtgttcctaatggactggcagtacgacaagaagatttgggcatcatg
cagtcctctgtagtgcagaaagctctggagatgggcttcgatgctgcagatgttgagaga
acagcccgggaggggctgcgtaagactggggtggagtataactcagtggaagctctgatc
agtgacctgaccagtgctgaaagcgagtcagatgaaacacaagataacaaggaggaggac
cctatggagaagctgcggaaactacagcaggagaagctctgtaaagtgtgcatggacaaa
aacattgccatagtcttcatcccctgtggacacctggccacctgcaagaagtgttccgag
gtccttagtaaatgccccatatgctgcacacctatcaagcagaaggttaaaacctacatc
tcgtaa
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