Polyodon spathula (Mississippi paddlefish): 121295627
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Entry
121295627 CDS
T07273
Name
(RefSeq) pro-epidermal growth factor-like isoform X1
KO
K04357
epidermal growth factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04012
ErbB signaling pathway
pspa04020
Calcium signaling pathway
pspa04068
FoxO signaling pathway
pspa04510
Focal adhesion
pspa04540
Gap junction
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121295627
04012 ErbB signaling pathway
121295627
04068 FoxO signaling pathway
121295627
04020 Calcium signaling pathway
121295627
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121295627
04540 Gap junction
121295627
09142 Cell motility
04810 Regulation of actin cytoskeleton
121295627
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121295627
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Growth factors (RTK binding)
121295627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
cEGF
FXa_inhibition
EGF_3
EGF_CA
EGF
Vgb_lyase
DUF5050
hEGF
SGL
EGF_MSP1_1
Arylesterase
Plasmod_Pvs28
EGF_LRP2
PTE
Motif
Other DBs
NCBI-GeneID:
121295627
NCBI-ProteinID:
XP_041076453
LinkDB
All DBs
Position
2:complement(34915017..34960332)
Genome browser
AA seq
1247 aa
AA seq
DB search
MLLATFLTVVVNVALVNPSLAPESTCLDGYKLATDNSTCIDIDECHEGGLGTCGQICHNS
PGSYICSCLPGYTLDDNTWSCFVDAPVPYLIFSHGNAIFRIDREGSNHKKLVTNTGISVL
LDFHYNEERIYWVDSDKGLVERVFMNATNREKVRSVGKGISGFAVNWIQKNIIWTNHQKG
SIEVADMDGKNSRVLLENVSQPSGITVDPIQKFIFWISDGLVPSINQANVDGEKVITVLS
TSEKIKTLSLDFIDKRLFWVQYGANDESAIGSCDYNGDAVHIMKQLIQSQPFGMSLFAEY
IYYSELKTGTIRRANKYTGEDVGTINPKPSFLPPADVKVVHPFKQPASSQTAGWSSEQGC
DATKEDCLSVCTRDAEKEQCECKDGYVLSKDGRSCEDVNECAFWNHGCTLGCENIPGSYF
CTCPGGFILLSDMKTCHELVPCLKNYTECSYGCVQTAKGPVCVCPEGSVLRPDGRSCTGC
TAPDNGGCSQICVALSPVKWECECLPGYRLKPDGKHCSATGPRPYLLFATTQDIQRINFD
GTAYQSLLDKQMGRVLALDYDPVENKVYFAHTGLKWLERANLDGSEREVLLREDLDYPEG
LAVDWINRKLYWTDRGLSRIEKSDLNGVHREVIISEGVDKPRGIAVHPLAKKLFWTDWGE
KPCIESSSLEGGVRLVIANTNLISPNGITIDYLADKLYWCDAKRSVIEVADLDGSNRRIL
TQIEVGRPFDVAVFEDHVWFTDWGKPSIMRVDKWTGQNQLRLRGNMLRPFSLIVVHPLAK
PGADPCLYENGGCSQFCENSFGVPHCLCHEGFVKHADDGVCHPVSIALTTPVSRVTLSHS
QLLMSNTTLRDESNPLAHPSPSAATEEQPKSIQVAEIMVSDQDHCSALECDVNAQCIPAE
GGAVCQCLEGFTGDGNACNDIDECVVGIALCSMQLADCINTEGSYVCRCNAGYNGDGLYC
SDIDECKFEIHSCDKHADCVNTEGNYTCTCRTGYSGSGFICEGVVAPTTMMRTSSSSETT
TYWRNDHLEDCPSSYEEYCLHGAVCFHIPEIGSYACNCVTGYMGERCQYSDLEWWELQRE
EEEKRRNLTIAVCMIIPIVLLSIGACATYCYRSKKYPMKSQYADEMSETCSSDNSITETS
TSSVQRFYVVLEHSSKGDSKVIHVVGCNSRRVCHSCSSETGESVASEEACNLQRDRKGLV
FVSQVPCSHMQQDTNRTVLHLRQEENLIYLEDNESDIGGGSRSPQPV
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgctacttttttgacagtggtggtcaatgttgctttggtaaacccttctctg
gctccggaatcaacatgcttggatggatacaagttagctactgacaattccacttgtata
gacattgatgaatgccatgaaggaggattggggacttgtgggcaaatctgtcacaacagt
ccaggctcctatatctgttcctgcttacctggttacacactggatgataacacatggtcg
tgctttgttgatgcccctgtgccctacctcatcttcagccatggaaatgccattttccgg
attgacagagaaggatccaatcacaagaaactggtgacaaacacagggatctctgtcctg
ttggacttccactataatgaagaaagaatttactgggtagactctgacaagggtcttgta
gaaagggttttcatgaatgccaccaacagggagaaagtacgttcagttggaaaaggtatt
tctggatttgctgtgaactggattcagaaaaacattatctggaccaatcatcagaaggga
agcattgaagttgcagacatggatgggaagaattccagggtccttttagagaatgtgtcc
caaccaagtggcatcactgttgatcccatccaaaagtttatattttggatttcagatgga
ctggtaccaagcatcaatcaagcaaatgttgatggtgaaaaggtcatcacggttttgagc
actagtgagaaaataaaaacactgtctctggattttatcgacaaaagattgttttgggtc
caatatggcgcgaatgatgagagtgccattggatcttgtgactacaatggtgatgctgtt
catattatgaaacaattaatacagtcccagccttttgggatgtctttatttgcagagtat
atatactattcagagttgaaaactggtaccattagaagagccaacaaatacacaggcgag
gatgtcggcaccatcaaccccaagccttcatttcttcctcctgctgatgtcaaagttgta
caccctttcaaacaacctgcatcctcccaaacagctggttggtcttcagagcaggggtgt
gatgctacgaaagaggactgcttaagtgtgtgcaccagagatgcagagaaagagcaatgt
gaatgtaaagatggctatgtcctcagcaaagacggcagatcttgtgaagatgtcaatgaa
tgtgctttctggaaccatggctgtactttaggctgtgaaaacatcccaggctcctatttc
tgtacctgtcctggaggtttcattcttctttctgatatgaaaacctgtcacgagcttgtc
ccatgcttgaaaaactacactgaatgcagctatggttgtgtccagacagctaaaggaccc
gtgtgtgtgtgtccagaaggatctgtgttaagaccagatggaagatcatgcacaggttgc
actgcaccagataatggaggttgtagccagatctgtgtggctttgagtccagtgaagtgg
gaatgcgaatgcttgccaggctatcgactgaaacctgatgggaagcattgcagtgcaacg
ggtcccagaccttatttgctttttgcaactactcaagacattcagcgcatcaattttgat
ggcacagcttaccagagtctactagataagcagatggggagagtcttagctttggactat
gaccctgttgaaaataaggtttattttgcacacacaggcctgaagtggctggaaagagct
aacctggacgggagtgaacgtgaggtgctgctgcgtgaagacctggattatcctgaaggc
ttagctgtggactggattaaccgtaaactgtactggactgaccgagggctgtccagaatt
gaaaagagtgacctaaatggggttcacagagaagtgatcatcagcgagggtgttgacaag
ccaagaggaatagctgtgcacccactggcaaaaaagctgttctggacggactggggtgaa
aagccttgcatagaaagctcttccttggaaggtggcgtccgattggttattgccaacacc
aatcttatttcaccgaatggaatcaccatagactacctggcagacaagctctactggtgt
gatgccaagcgatcagtcatcgaagtggcagatctggatggctccaaccgacggatcctg
acacagatcgaagtaggacgcccttttgatgtagctgtgtttgaagatcacgtttggttc
actgattgggggaagccatccatcatgagggttgacaagtggacagggcaaaaccagctg
cgtcttcgcgggaatatgctaagacccttctccttgattgttgttcaccctttagccaaa
ccaggtgctgatccctgcctgtatgaaaatggtggctgtagtcaattttgtgagaatagt
tttggagttcctcattgcttgtgtcatgagggctttgtcaagcatgctgatgatggagtc
tgccacccagtcagcattgccttgacaactccagtgtctcgtgtgaccctttctcacagt
cagctcttgatgtcaaacacaacattaagagatgaaagcaatccactggctcatcccagc
ccatcagcagccactgaggagcagccaaaaagcatccaggtggcagagataatggtatca
gatcaagatcattgctcagctcttgaatgtgatgttaatgctcagtgtatcccagcagaa
gggggagctgtttgtcaatgtttggaagggtttaccggtgatggcaacgcatgcaatgac
attgatgaatgcgttgttggcattgctctgtgcagcatgcagcttgcagactgcattaac
acagagggtagctatgtctgccggtgcaatgccggctacaatggggatggcttgtactgc
tcggatattgatgagtgtaagtttgagatccacagctgtgacaaacatgctgactgtgtc
aatacagagggaaactacacctgcacatgtaggactgggtattctggatcaggcttcatc
tgtgaaggtgtggttgctcctaccactatgatgaggactagcagttcctctgaaactaca
acctactggcgcaatgatcacctggaagactgtccgtcttcatatgaggaatactgtctt
catggagcagtgtgcttccacattccggagattggatcctacgcatgcaactgtgtgaca
ggctacatgggggaacggtgccagtacagtgacttggagtggtgggagttgcaacgagag
gaagaggagaagaggcgcaaccttactattgcagtctgcatgatcataccgatcgtactc
ttgtctataggagcctgtgcaacgtactgctacaggtctaagaagtacccaatgaagagt
cagtatgctgatgagatgagcgagacctgcagcagtgacaacagcataaccgaaacttca
accagcagtgtgcaacggttctatgttgtcttagaacatagctcaaaaggagacagcaaa
gttatccacgtggttggttgtaacagcagacgggtttgccattcctgttcctcagaaaca
ggagaaagtgtagcgtctgaggaagcttgtaatttgcagagggacagaaaaggcctggtt
tttgtatcccaggtgccttgtagccatatgcagcaggacaccaacaggactgtcctccat
cttagacaggaggagaacctcatatacctggaagataatgaatctgacatcggtgggggg
agcaggtcacctcagcctgtttaa
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